MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2827c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2827c (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv2827c Rv2826c (family_assigned) — nucleotidyl transferase AbiEii/AbiGii toxin family Rv2826c Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c Rv2825c (dark) — hypothetical protein Rv2825c Rv2828c (family_assigned) — DUF1802 family protein Rv2828c Rv2828A (dark) — hypothetical protein Rv2828A vapC22 (family_assigned) — PIN domain-containing protein vapC22 vapB22 (family_assigned) — type II toxin-antitoxin system prevent-host-death vapB22 Rv1045 (family_assigned) — nucleotidyl transferase AbiEii/AbiGii toxin family Rv1045 Rv0909 (requalified) — antitoxin Rv0909 Rv0837c (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv0837c Rv0078A (family_assigned) — hypothetical protein Rv0078A Rv3182 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv3182 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c ethR (family_assigned) — HTH-type transcriptional regulator EthR ethR Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv3779 (family_assigned) — DUF6541 family protein Rv3779 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c Rv0517 (requalified) — acyltransferase Rv0517 Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c echA16 (requalified) — enoyl-CoA hydratase echA16 ligC (requalified) — ATP-dependent DNA ligase ligC Rv1156 (requalified) — HhH-GPD-type base excision DNA repair protein Rv1156 Rv1044 (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv1044 Rv2209 (requalified) — MFS transporter Rv2209 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 Rv0910 (family_assigned) — SRPBCC family protein Rv0910 phoY1 (requalified) — phosphate signaling complex protein PhoU phoY1 Rv0911 (family_assigned) — VOC family protein Rv0911 Rv0906 (requalified) — MBL fold metallo-hydrolase Rv0906 ctpE (requalified) — cation-translocating P-type ATPase ctpE Rv0907 (family_assigned) — hypothetical protein Rv0907 Rv0836c (family_assigned) — hypothetical protein Rv0836c PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 Rv1004c (family_assigned) — hypothetical protein Rv1004c Rv0078B (family_assigned) — hypothetical protein Rv0078B Rv0080 (family_assigned) — pyridoxamine 5'-phosphate oxidase family protein Rv0080

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.