MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2813 · 37 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2813 (family_assigned) — ExeA family protein Rv2813 Rv2812 (family_assigned) — helix-turn-helix domain-containing protein Rv2812 Rv3638 (family_assigned) — ATP-binding protein Rv3638 Rv2811 (family_assigned) — hypothetical protein Rv2811 gltB (family_assigned) — glutamate synthase large subunit gltB Rv3327 (family_assigned) — IS110 family transposase Rv3327 Rv0197 (requalified) — oxidoreductase Rv0197 Rv3212 (family_assigned) — hypothetical protein Rv3212 csm4 (requalified) — type III-A CRISPR-associated RAMP protein Csm4 csm4 Rv3786c (family_assigned) — peptidoglycan DD-metalloendopeptidase family prote Rv3786c Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv3349c (requalified) — transposase Rv3349c Rv3428c (requalified) — transposase Rv3428c dnaB (requalified) — replicative DNA helicase dnaB Rv2943 (requalified) — insertion sequence element IS1533 transposase Rv2943 Rv0689c (family_assigned) — hypothetical protein Rv0689c gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 cysC (requalified) — adenylyl-sulfate kinase cysC moaX (requalified) — MoaD-MoaE fusion protein MoaX moaX Rv2807 (family_assigned) — hypothetical protein Rv2807 Rv3322c (requalified) — methyltransferase Rv3322c Rv0196 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0196 qcrC (requalified) — cytochrome c qcrC tuf (requalified) — elongation factor Tu tuf fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 Rv0295c (family_assigned) — Stf0 family sulfotransferase Rv0295c rhlE (requalified) — DEAD/DEAH box helicase rhlE Rv3205c (family_assigned) — hypothetical protein Rv3205c lppL (family_assigned) — hypothetical protein lppL Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.