MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2812 · 43 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2812 (family_assigned) — helix-turn-helix domain-containing protein Rv2812 Rv2813 (family_assigned) — ExeA family protein Rv2813 Rv3786c (family_assigned) — peptidoglycan DD-metalloendopeptidase family prote Rv3786c Rv2811 (family_assigned) — hypothetical protein Rv2811 Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv3349c (requalified) — transposase Rv3349c Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv3896c (requalified) — transglycosylase Rv3896c Rv0804 (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0804 Rv1158c (dark) — hypothetical protein Rv1158c Rv3638 (family_assigned) — ATP-binding protein Rv3638 gltB (family_assigned) — glutamate synthase large subunit gltB Rv3787c (requalified) — class I SAM-dependent methyltransferase Rv3787c hsr1 (requalified) — hypothetical protein hsr1 Rv0689c (family_assigned) — hypothetical protein Rv0689c Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c Rv2686c (family_assigned) — fluoroquinolones efflux ABC transporter permease Rv2686c Rv0210 (family_assigned) — hypothetical protein Rv0210 pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 Rv3900c (family_assigned) — hypothetical protein Rv3900c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 Rv2086 (family_assigned) — hypothetical protein Rv2086 Rv2311 (family_assigned) — hypothetical protein Rv2311 Rv3605c (family_assigned) — DUF3180 domain-containing protein Rv3605c Rv0955 (family_assigned) — DUF6350 family protein Rv0955 pimE (requalified) — mannosyltransferase pimE PPE2 (family_assigned) — PPE family protein PPE2 PPE2 mycP2 (requalified) — type VII secretion system ESX-2 serine protease my mycP2 Rv3888c (family_assigned) — MinD/ParA family protein Rv3888c eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 eccE2 (family_assigned) — type VII secretion system ESX-2 subunit EccE2 eccE2 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM Rv3909 (dark) — hypothetical protein Rv3909 murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ mutT4 (requalified) — NUDIX hydrolase mutT4 trxC (requalified) — thioredoxin trxC trxB2 (requalified) — thioredoxin-disulfide reductase trxB2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.