MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2808 · 44 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2808 (requalified) — hypothetical protein Rv2808 Rv2809 (family_assigned) — hypothetical protein Rv2809 Rv2807 (family_assigned) — hypothetical protein Rv2807 Rv3766 (family_assigned) — hypothetical protein Rv3766 Rv2004c (family_assigned) — AAA family ATPase Rv2004c Rv2003c (family_assigned) — hypothetical protein Rv2003c rpsK (requalified) — 30S ribosomal protein S11 rpsK Rv2283 (dark) — hypothetical protein Rv2283 Rv2402 (requalified) — trehalase Rv2402 amiD (requalified) — amidase amiD ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD lppC (family_assigned) — YbhB/YbcL family Raf kinase inhibitor-like protein lppC Rv3327 (family_assigned) — IS110 family transposase Rv3327 Rv2806 (dark) — hypothetical protein Rv2806 Rv2805 (requalified) — transposase Rv2805 Rv2310 (requalified) — excisionase Rv2310 Rv2021c (family_assigned) — XRE family transcriptional regulator Rv2021c Rv1812c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1812c Rv0569 (family_assigned) — DUF1918 domain-containing protein Rv0569 Rv2625c (family_assigned) — site-2 protease family protein Rv2625c Rv2005c (requalified) — universal stress protein Rv2005c otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 Rv0571c (family_assigned) — phosphoribosyltransferase family protein Rv0571c nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ ctpF (requalified) — cation-transporting P-type ATPase ctpF Rv2624c (requalified) — universal stress protein Rv2624c rplM (requalified) — 50S ribosomal protein L13 rplM rplF (requalified) — 50S ribosomal protein L6 rplF rplD (requalified) — 50S ribosomal protein L4 rplD rplQ (requalified) — 50S ribosomal protein L17 rplQ rpsC (requalified) — 30S ribosomal protein S3 rpsC rplU (requalified) — 50S ribosomal protein L21 rplU lipM (family_assigned) — alpha/beta hydrolase lipM Rv2285 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv2285 Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c Rv0894 (family_assigned) — hypothetical protein Rv0894 Rv0395 (dark) — hypothetical protein Rv0395 otsB2 (requalified) — trehalose-phosphatase otsB2 treS (requalified) — maltose alpha-D-glucosyltransferase treS treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv3401 (family_assigned) — glycoside hydrolase family 65 protein Rv3401 otsA (requalified) — trehalose-6-phosphate synthase otsA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.