MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2773c · 46 genes shown · anchor dapA · open gene page → · ← back to 1 hop

Evidence: Min score 0
dapB (requalified) — 4-hydroxy-tetrahydrodipicolinate reductase dapB dapA (requalified) — 4-hydroxy-tetrahydrodipicolinate synthase dapA dapD (requalified) — 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxyla dapD Rv2772c (family_assigned) — hypothetical protein Rv2772c lysA (requalified) — diaminopimelate decarboxylase lysA Rv2771c (family_assigned) — flavodoxin family protein Rv2771c pcnA (requalified) — poly(A) polymerase PcnA pcnA Rv2774c (dark) — hypothetical protein Rv2774c asd (requalified) — aspartate-semialdehyde dehydrogenase asd dapF (requalified) — diaminopimelate epimerase dapF ask (requalified) — aspartate kinase ask thrA (requalified) — homoserine dehydrogenase thrA thrB (requalified) — homoserine kinase thrB rnj (requalified) — ribonuclease J rnj thyX (requalified) — FAD-dependent thymidylate synthase thyX dapC (requalified) — pyridoxal phosphate-dependent aminotransferase dapC argD (requalified) — acetylornithine transaminase argD dapE (requalified) — succinyl-diaminopimelate desuccinylase DapE dapE guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA amiA1 (requalified) — N-acyl-L-amino acid amidohydrolase AmiA amiA1 sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC sdhD (family_assigned) — succinate dehydrogenase hydrophobic membrane ancho sdhD Rv1382 (requalified) — transporter Rv1382 zapE (requalified) — cell division protein ZapE zapE murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE argS (requalified) — arginine--tRNA ligase argS thrC (requalified) — threonine synthase thrC Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 PPE44 (family_assigned) — PPE family protein PPE44 PPE44 rpfC (requalified) — resuscitation-promoting factor RpfC rpfC Rv3906c (requalified) — pullulanase Rv3906c mutT4 (requalified) — NUDIX hydrolase mutT4 Rv3909 (dark) — hypothetical protein Rv3909 murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 Rv2775 (requalified) — GCN5-like N-acetyltransferase Rv2775 Rv3707c (requalified) — hypothetical protein Rv3707c miaA (requalified) — tRNA (adenosine(37)-N6)-dimethylallyltransferase M miaA Rv2728c (family_assigned) — hypothetical protein Rv2728c hflX (family_assigned) — GTP-binding protein HflX hflX asnB (requalified) — asparagine synthase (glutamine-hydrolyzing) asnB purA (requalified) — adenylosuccinate synthase purA argG (requalified) — argininosuccinate synthase argG nadB (requalified) — L-aspartate oxidase nadB metA (requalified) — homoserine O-acetyltransferase metA purM (requalified) — phosphoribosylformylglycinamidine cyclo-ligase purM

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.