MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2772c · 46 genes shown · anchor dapB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2772c (family_assigned) — hypothetical protein Rv2772c dapB (requalified) — 4-hydroxy-tetrahydrodipicolinate reductase dapB Rv2771c (family_assigned) — flavodoxin family protein Rv2771c sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC sdhD (family_assigned) — succinate dehydrogenase hydrophobic membrane ancho sdhD Rv1382 (requalified) — transporter Rv1382 zapE (requalified) — cell division protein ZapE zapE Rv2774c (dark) — hypothetical protein Rv2774c sdhB (family_assigned) — succinate dehydrogenase iron-sulfur subunit sdhB sdhA (family_assigned) — succinate dehydrogenase flavoprotein subunit sdhA sepH (requalified) — septation protein SepH sepH Rv2775 (requalified) — GCN5-like N-acetyltransferase Rv2775 Rv2693c (dark) — DUF3159 domain-containing protein Rv2693c dapA (requalified) — 4-hydroxy-tetrahydrodipicolinate synthase dapA dapD (requalified) — 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxyla dapD lysA (requalified) — diaminopimelate decarboxylase lysA pcnA (requalified) — poly(A) polymerase PcnA pcnA Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 PPE44 (family_assigned) — PPE family protein PPE44 PPE44 rpfC (requalified) — resuscitation-promoting factor RpfC rpfC frdB (family_assigned) — succinate dehydrogenase iron-sulfur subunit frdB Rv0247c (family_assigned) — succinate dehydrogenase/fumarate reductase iron-su Rv0247c frdA (family_assigned) — fumarate reductase (quinol) flavoprotein subunit frdA carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB pyrC (requalified) — dihydroorotase pyrC carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA pyrB (family_assigned) — aspartate carbamoyltransferase catalytic subunit pyrB pyrF (requalified) — orotidine-5'-phosphate decarboxylase pyrF pyrR (family_assigned) — bifunctional pyr operon transcriptional regulator/ pyrR ribD (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribD Rv0248c (family_assigned) — fumarate reductase/succinate dehydrogenase flavopr Rv0248c sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC fum (requalified) — class II fumarate hydratase fum serC (requalified) — phosphoserine transaminase serC Rv0885 (requalified) — diiron oxygenase Rv0885 fprB (requalified) — FAD-dependent oxidoreductase fprB Rv1002c (requalified) — dolichyl-phosphate-mannose--protein mannosyltransf Rv1002c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv2209 (requalified) — MFS transporter Rv2209 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c Rv2694c (family_assigned) — OB-fold nucleic acid binding domain-containing pro Rv2694c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.