MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2747 · 46 genes shown · anchor pgsA3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
argA (requalified) — amino-acid N-acetyltransferase argA argB (requalified) — acetylglutamate kinase argB argJ (requalified) — bifunctional glutamate N-acetyltransferase/amino-a argJ Rv0428c (family_assigned) — GNAT family N-acetyltransferase Rv0428c aspC (requalified) — pyridoxal phosphate-dependent aminotransferase aspC gdh (requalified) — NAD-glutamate dehydrogenase gdh pgsA3 (requalified) — CDP-diacylglycerol--glycerol-3-phosphate 3-phospha pgsA3 gltB (family_assigned) — glutamate synthase large subunit gltB argG (requalified) — argininosuccinate synthase argG clgR (family_assigned) — transcriptional regulator ClgR clgR Rv2169c (dark) — DUF3040 domain-containing protein Rv2169c hadC (family_assigned) — (3R)-hydroxyacyl-ACP dehydratase subunit HadC hadC argC (requalified) — N-acetyl-gamma-glutamyl-phosphate reductase argC argD (requalified) — acetylornithine transaminase argD argF (requalified) — ornithine carbamoyltransferase argF argR (requalified) — arginine repressor argR def (requalified) — peptide deformylase def ilvD (requalified) — dihydroxy-acid dehydratase ilvD leuA (requalified) — 2-isopropylmalate synthase leuA ilvE (requalified) — branched-chain amino acid aminotransferase ilvE ald (requalified) — alanine dehydrogenase ald Rv2475c (family_assigned) — thioesterase family protein Rv2475c rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA garA (requalified) — glycogen accumulation regulator GarA garA gltD (family_assigned) — glutamate synthase subunit beta gltD glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 cdsA (requalified) — phosphatidate cytidylyltransferase cdsA pssA (requalified) — CDP-diacylglycerol--serine O-phosphatidyltransfera pssA pgsA1 (requalified) — CDP-diacylglycerol--inositol 3-phosphatidyltransfe pgsA1 cdh (requalified) — CDP-diacylglycerol diphosphatase cdh cinA (requalified) — competence/damage-inducible protein A cinA fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB argH (requalified) — argininosuccinate lyase argH 35kd_ag (family_assigned) — hypothetical protein 35kd_ag sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv2743c (family_assigned) — hypothetical protein Rv2743c Rv2170 (requalified) — N-acetyltransferase Rv2170 Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 qcrC (requalified) — cytochrome c qcrC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.