MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2745c · 46 genes shown · anchor rbpA · open gene page → · ← back to 1 hop

Evidence: Min score 0
clgR (family_assigned) — transcriptional regulator ClgR clgR 35kd_ag (family_assigned) — hypothetical protein 35kd_ag sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c pgsA3 (requalified) — CDP-diacylglycerol--glycerol-3-phosphate 3-phospha pgsA3 Rv2743c (family_assigned) — hypothetical protein Rv2743c Rv2708c (family_assigned) — hypothetical protein Rv2708c Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv2146c (family_assigned) — YggT family protein Rv2146c Rv3195 (requalified) — zinc-dependent metalloprotease Rv3195 Rv2256c (dark) — hypothetical protein Rv2256c htpX (requalified) — zinc metalloprotease HtpX htpX Rv2468c (requalified) — hypothetical protein Rv2468c Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR sigA (requalified) — RNA polymerase sigma factor sigA whiA (family_assigned) — DNA-binding protein WhiA whiA Rv2239c (family_assigned) — hypothetical protein Rv2239c cei (requalified) — envelope integrity protein Cei cei pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 cdsA (requalified) — phosphatidate cytidylyltransferase cdsA pssA (requalified) — CDP-diacylglycerol--serine O-phosphatidyltransfera pssA pgsA1 (requalified) — CDP-diacylglycerol--inositol 3-phosphatidyltransfe pgsA1 cdh (requalified) — CDP-diacylglycerol diphosphatase cdh cinA (requalified) — competence/damage-inducible protein A cinA lppL (family_assigned) — hypothetical protein lppL pirG (requalified) — exported repetitive protein pirG chiZ (requalified) — cell wall hydrolase ChiZ chiZ lmeA (requalified) — mannan chain length control protein LmeA lmeA Rv3707c (requalified) — hypothetical protein Rv3707c Rv2709 (dark) — DUF3099 domain-containing protein Rv2709 Rv2219 (family_assigned) — DUF4191 domain-containing protein Rv2219 Rv2731 (family_assigned) — DUF349 domain-containing protein Rv2731 secG (family_assigned) — preprotein translocase subunit SecG secG whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.