MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2743c · 46 genes shown · anchor lppL · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2743c (family_assigned) — hypothetical protein Rv2743c 35kd_ag (family_assigned) — hypothetical protein 35kd_ag lppL (family_assigned) — hypothetical protein lppL pirG (requalified) — exported repetitive protein pirG chiZ (requalified) — cell wall hydrolase ChiZ chiZ lmeA (requalified) — mannan chain length control protein LmeA lmeA Rv3707c (requalified) — hypothetical protein Rv3707c Rv1486c (family_assigned) — hypothetical protein Rv1486c Rv0996 (family_assigned) — hypothetical protein Rv0996 ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 lpqF (requalified) — serine hydrolase lpqF Rv3527 (family_assigned) — hypothetical protein Rv3527 clgR (family_assigned) — transcriptional regulator ClgR clgR htpX (requalified) — zinc metalloprotease HtpX htpX sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB Rv2468c (requalified) — hypothetical protein Rv2468c Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c Rv0431 (requalified) — tuberculin-like peptide Rv0431 Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv0312 (family_assigned) — Hsp70 family protein Rv0312 fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA Rv1158c (dark) — hypothetical protein Rv1158c mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 lexA (requalified) — transcriptional repressor LexA lexA nrdR (family_assigned) — transcriptional regulator NrdR nrdR Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c thiX (family_assigned) — thioredoxin family protein thiX hbhA (requalified) — heparin-binding hemagglutinin HbhA hbhA lprC (family_assigned) — DUF3558 domain-containing protein lprC ask (requalified) — aspartate kinase ask asd (requalified) — aspartate-semialdehyde dehydrogenase asd Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 Rv1489 (family_assigned) — hypothetical protein Rv1489 Rv2360c (family_assigned) — hypothetical protein Rv2360c rsbW (requalified) — anti-sigma B factor RsbW rsbW moeA1 (requalified) — molybdopterin molybdenumtransferase 1 moeA1 Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv0385 (requalified) — FAD-binding oxidoreductase Rv0385 Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 pyrE (requalified) — orotate phosphoribosyltransferase pyrE

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.