MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2734 · 45 genes shown · anchor miaB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2734 (family_assigned) — DUF5131 family protein Rv2734 Rv2735c (requalified) — three-Cys-motif partner protein TcmP Rv2735c miaB (requalified) — tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiot miaB Rv2732c (family_assigned) — hypothetical protein Rv2732c recX (requalified) — recombination regulator RecX recX alkA (family_assigned) — bifunctional regulatory protein/DNA repair enzyme alkA ogt (requalified) — methylated-DNA--protein-cysteine methyltransferase ogt rplO (requalified) — 50S ribosomal protein L15 rplO nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB recA (requalified) — intein-containing recombinase RecA recA PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv2209 (requalified) — MFS transporter Rv2209 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 miaA (requalified) — tRNA (adenosine(37)-N6)-dimethylallyltransferase M miaA Rv2880c (family_assigned) — Conserved hypothetical protein Rv2880c gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI Rv2879c (family_assigned) — Conserved hypothetical protein Rv2879c rphA (requalified) — ribonuclease PH rphA Rv3205c (family_assigned) — hypothetical protein Rv3205c Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv1109c (requalified) — lipid droplet-associated protein Rv1109c radA (requalified) — DNA repair protein RadA radA ruvC (requalified) — crossover junction endodeoxyribonuclease RuvC ruvC thiL (requalified) — thiamine-phosphate kinase thiL Rv1318c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1318c xthA (requalified) — exodeoxyribonuclease III protein XthA xthA Rv1321 (requalified) — endonuclease NucS Rv1321 Rv1322 (family_assigned) — hypothetical protein Rv1322 Rv3394c (family_assigned) — DNA polymerase Y family protein Rv3394c tagA (requalified) — DNA-3-methyladenine glycosylase I tagA Rv1319c (requalified) — adenylate cyclase Rv1319c rplN (requalified) — 50S ribosomal protein L14 rplN rpsM (requalified) — 30S ribosomal protein S13 rpsM rplC (requalified) — 50S ribosomal protein L3 rplC rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmI (requalified) — 50S ribosomal protein L35 rpmI rplX (requalified) — 50S ribosomal protein L24 rplX nuoK (family_assigned) — NADH-quinone oxidoreductase subunit NuoK nuoK nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG nuoJ (family_assigned) — NADH-quinone oxidoreductase subunit J nuoJ nuoN (family_assigned) — NADH-quinone oxidoreductase subunit NuoN nuoN nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.