MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2731 · 46 genes shown · anchor rbpA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2731 (family_assigned) — DUF349 domain-containing protein Rv2731 scpA (requalified) — segregation/condensation protein A scpA Rv2730 (dark) — hypothetical protein Rv2730 rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv2219 (family_assigned) — DUF4191 domain-containing protein Rv2219 Rv2708c (family_assigned) — hypothetical protein Rv2708c Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 Rv2729c (family_assigned) — DMT family transporter Rv2729c rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv2696c (dark) — DUF3710 domain-containing protein Rv2696c whiA (family_assigned) — DNA-binding protein WhiA whiA scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB Rv1708 (requalified) — initiation inhibitor protein Rv1708 cmk (requalified) — (d)CMP kinase cmk smc (requalified) — chromosome segregation protein SMC smc Rv1711 (requalified) — pseudouridine synthase Rv1711 engA (requalified) — ribosome biogenesis GTPase Der engA miaA (requalified) — tRNA (adenosine(37)-N6)-dimethylallyltransferase M miaA Rv2728c (family_assigned) — hypothetical protein Rv2728c rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA sigA (requalified) — RNA polymerase sigma factor sigA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB Rv2239c (family_assigned) — hypothetical protein Rv2239c Rv2256c (dark) — hypothetical protein Rv2256c cei (requalified) — envelope integrity protein Cei cei Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2191 (family_assigned) — hypothetical protein Rv2191 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ lipB (requalified) — lipoyl(octanoyl) transferase LipB lipB lipA (requalified) — lipoyl synthase lipA Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT Rv2709 (dark) — DUF3099 domain-containing protein Rv2709 secG (family_assigned) — preprotein translocase subunit SecG secG whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv2529 (family_assigned) — hypothetical protein Rv2529

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.