MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2729c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2729c (family_assigned) — DMT family transporter Rv2729c glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv2731 (family_assigned) — DUF349 domain-containing protein Rv2731 Rv3434c (family_assigned) — rhomboid-like protein Rv3434c Rv2730 (dark) — hypothetical protein Rv2730 miaA (requalified) — tRNA (adenosine(37)-N6)-dimethylallyltransferase M miaA Rv2728c (family_assigned) — hypothetical protein Rv2728c manB (requalified) — D-alpha-D-mannose-1-phosphate guanylyltransferase manB eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 dapF (requalified) — diaminopimelate epimerase dapF glf (requalified) — UDP-galactopyranose mutase glf glgE (requalified) — alpha-1,4-glucan:maltose-1-phosphate maltosyltrans glgE glgP (family_assigned) — glycosyltransferase family 1 protein glgP malQ (requalified) — 4-alpha-glucanotransferase malQ treX (requalified) — maltooligosyl trehalose synthase treX Rv3032 (requalified) — glycogen synthase Rv3032 mak (requalified) — maltokinase mak treY (requalified) — maltooligosyl trehalose synthase treY otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 otsB2 (requalified) — trehalose-phosphatase otsB2 treS (requalified) — maltose alpha-D-glucosyltransferase treS Rv2402 (requalified) — trehalase Rv2402 topA (requalified) — type I DNA topoisomerase topA polA (requalified) — DNA polymerase I polA lprE (family_assigned) — LppP/LprE family lipoprotein lprE Rv2090 (requalified) — 5'-3' exonuclease Rv2090 rplA (requalified) — 50S ribosomal protein L1 rplA recA (requalified) — intein-containing recombinase RecA recA scpA (requalified) — segregation/condensation protein A scpA rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv2219 (family_assigned) — DUF4191 domain-containing protein Rv2219 Rv3435c (family_assigned) — DUF4436 domain-containing protein Rv3435c Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c gadB (requalified) — glutamate decarboxylase gadB glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 hflX (family_assigned) — GTP-binding protein HflX hflX miaB (requalified) — tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiot miaB pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH Rv1486c (family_assigned) — hypothetical protein Rv1486c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.