MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2728c · 46 genes shown · anchor miaA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2728c (family_assigned) — hypothetical protein Rv2728c miaA (requalified) — tRNA (adenosine(37)-N6)-dimethylallyltransferase M miaA dapF (requalified) — diaminopimelate epimerase dapF hflX (family_assigned) — GTP-binding protein HflX hflX Rv1486c (family_assigned) — hypothetical protein Rv1486c Rv2844 (family_assigned) — ferritin-like domain-containing protein Rv2844 Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c Rv2729c (family_assigned) — DMT family transporter Rv2729c lmeA (requalified) — mannan chain length control protein LmeA lmeA Rv2180c (family_assigned) — integral membrane protein Rv2180c Rv3839 (requalified) — DUF2470 domain-containing protein Rv3839 Rv2731 (family_assigned) — DUF349 domain-containing protein Rv2731 lprC (family_assigned) — DUF3558 domain-containing protein lprC miaB (requalified) — tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiot miaB pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH lysA (requalified) — diaminopimelate decarboxylase lysA dapE (requalified) — succinyl-diaminopimelate desuccinylase DapE dapE murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE rplK (requalified) — 50S ribosomal protein L11 rplK rplS (requalified) — 50S ribosomal protein L19 rplS rplU (requalified) — 50S ribosomal protein L21 rplU rpmA (requalified) — 50S ribosomal protein L27 rpmA rpmF (requalified) — 50S ribosomal protein L32 rpmF rplQ (requalified) — 50S ribosomal protein L17 rplQ Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 Rv1489 (family_assigned) — hypothetical protein Rv1489 Rv2360c (family_assigned) — hypothetical protein Rv2360c Rv2743c (family_assigned) — hypothetical protein Rv2743c rsbW (requalified) — anti-sigma B factor RsbW rsbW lppL (family_assigned) — hypothetical protein lppL Rv2843 (family_assigned) — hypothetical protein Rv2843 nusA (requalified) — transcription termination factor NusA nusA rimP (requalified) — ribosome maturation factor RimP rimP Rv3118 (family_assigned) — hypothetical protein Rv3118 Rv0814c (family_assigned) — DUF1416 domain-containing protein Rv0814c Rv3605c (family_assigned) — DUF3180 domain-containing protein Rv3605c glcB (requalified) — malate synthase G glcB Rv1835c (family_assigned) — CocE/NonD family hydrolase Rv1835c Rv1324 (requalified) — co-chaperone YbbN Rv1324 ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 pirG (requalified) — exported repetitive protein pirG glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv2529 (family_assigned) — hypothetical protein Rv2529

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.