MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2727c · 46 genes shown · anchor hflX · open gene page → · ← back to 1 hop

Evidence: Min score 0
miaA (requalified) — tRNA (adenosine(37)-N6)-dimethylallyltransferase M miaA Rv2728c (family_assigned) — hypothetical protein Rv2728c hflX (family_assigned) — GTP-binding protein HflX hflX dapF (requalified) — diaminopimelate epimerase dapF miaB (requalified) — tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiot miaB pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH Rv2729c (family_assigned) — DMT family transporter Rv2729c ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG Rv2731 (family_assigned) — DUF349 domain-containing protein Rv2731 dnaG (requalified) — DNA primase dnaG ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH ruvX (requalified) — Holliday junction resolvase RuvX ruvX Rv1486c (family_assigned) — hypothetical protein Rv1486c Rv2844 (family_assigned) — ferritin-like domain-containing protein Rv2844 Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c rplK (requalified) — 50S ribosomal protein L11 rplK rplS (requalified) — 50S ribosomal protein L19 rplS rplU (requalified) — 50S ribosomal protein L21 rplU rpmA (requalified) — 50S ribosomal protein L27 rpmA rpmF (requalified) — 50S ribosomal protein L32 rpmF rplQ (requalified) — 50S ribosomal protein L17 rplQ lysA (requalified) — diaminopimelate decarboxylase lysA dapE (requalified) — succinyl-diaminopimelate desuccinylase DapE dapE murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE Rv2732c (family_assigned) — hypothetical protein Rv2732c Rv2880c (family_assigned) — Conserved hypothetical protein Rv2880c gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI Rv2879c (family_assigned) — Conserved hypothetical protein Rv2879c rphA (requalified) — ribonuclease PH rphA pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS leuS (requalified) — leucine--tRNA ligase leuS ileS (requalified) — isoleucine--tRNA ligase ileS rpsB (requalified) — 30S ribosomal protein S2 rpsB rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rplO (requalified) — 50S ribosomal protein L15 rplO mraZ (requalified) — division/cell wall cluster transcriptional repress mraZ pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB Rv2164c (family_assigned) — hypothetical protein Rv2164c rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsP (requalified) — 30S ribosomal protein S16 rpsP rpsF (requalified) — 30S ribosomal protein S6 rpsF glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv3434c (family_assigned) — rhomboid-like protein Rv3434c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.