MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2726c · 46 genes shown · anchor lysA · open gene page → · ← back to 1 hop

Evidence: Min score 0
dapF (requalified) — diaminopimelate epimerase dapF lysA (requalified) — diaminopimelate decarboxylase lysA dapE (requalified) — succinyl-diaminopimelate desuccinylase DapE dapE murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE miaA (requalified) — tRNA (adenosine(37)-N6)-dimethylallyltransferase M miaA Rv2728c (family_assigned) — hypothetical protein Rv2728c hflX (family_assigned) — GTP-binding protein HflX hflX asd (requalified) — aspartate-semialdehyde dehydrogenase asd dapB (requalified) — 4-hydroxy-tetrahydrodipicolinate reductase dapB dapA (requalified) — 4-hydroxy-tetrahydrodipicolinate synthase dapA gltB (family_assigned) — glutamate synthase large subunit gltB dapC (requalified) — succinyldiaminopimelate transaminase dapC carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB thrA (requalified) — homoserine dehydrogenase thrA argS (requalified) — arginine--tRNA ligase argS thrC (requalified) — threonine synthase thrC argD (requalified) — acetylornithine transaminase argD dapC (requalified) — pyridoxal phosphate-dependent aminotransferase dapC dapD (requalified) — 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxyla dapD argC (requalified) — N-acetyl-gamma-glutamyl-phosphate reductase argC murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC ftsW (family_assigned) — putative lipid II flippase FtsW ftsW miaB (requalified) — tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiot miaB pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH Rv1486c (family_assigned) — hypothetical protein Rv1486c Rv2844 (family_assigned) — ferritin-like domain-containing protein Rv2844 Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c rplK (requalified) — 50S ribosomal protein L11 rplK rplS (requalified) — 50S ribosomal protein L19 rplS rplU (requalified) — 50S ribosomal protein L21 rplU rpmA (requalified) — 50S ribosomal protein L27 rpmA rpmF (requalified) — 50S ribosomal protein L32 rpmF rplQ (requalified) — 50S ribosomal protein L17 rplQ ask (requalified) — aspartate kinase ask Rv3707c (requalified) — hypothetical protein Rv3707c Rv2772c (family_assigned) — hypothetical protein Rv2772c Rv2771c (family_assigned) — flavodoxin family protein Rv2771c pcnA (requalified) — poly(A) polymerase PcnA pcnA rnj (requalified) — ribonuclease J rnj thyX (requalified) — FAD-dependent thymidylate synthase thyX gltD (family_assigned) — glutamate synthase subunit beta gltD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.