MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2723 · 37 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2723 (family_assigned) — TerC/Alx family metal homeostasis membrane protein Rv2723 Rv2722 (dark) — hypothetical protein Rv2722 Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ kshB (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase reductase subuni kshB Rv0925c (family_assigned) — flavodoxin family protein Rv0925c pflA (requalified) — AmmeMemoRadiSam system radical SAM enzyme pflA pirG (requalified) — exported repetitive protein pirG Rv0312 (family_assigned) — Hsp70 family protein Rv0312 ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 Rv1157c (dark) — hypothetical protein Rv1157c ripB (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipB ripB treY (requalified) — maltooligosyl trehalose synthase treY treX (requalified) — maltooligosyl trehalose synthase treX otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 otsB2 (requalified) — trehalose-phosphatase otsB2 treS (requalified) — maltose alpha-D-glucosyltransferase treS Rv2402 (requalified) — trehalase Rv2402 kshA (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase subunit KshA kshA kstD (requalified) — 3-oxosteroid 1-dehydrogenase kstD hsaC (requalified) — iron-dependent extradiol dioxygenase HsaC hsaC hsaA (family_assigned) — flavin-dependent monooxygenase oxygenase subunit H hsaA Rv3572 (family_assigned) — hypothetical protein Rv3572 Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 mntH (requalified) — divalent metal cation transporter MntH mntH Rv0923c (family_assigned) — poly-gamma-glutamate hydrolase family protein Rv0923c Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 Rv0926c (requalified) — diacylglycerol kinase Rv0926c Rv0927c (family_assigned) — SDR family oxidoreductase Rv0927c rpfC (requalified) — resuscitation-promoting factor RpfC rpfC hisN (requalified) — histidinol-phosphatase hisN fadE24 (family_assigned) — acyl-CoA dehydrogenase family protein fadE24 Rv3136A (dark) — hypothetical protein Rv3136A fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 nirB (family_assigned) — nitrite reductase large subunit NirB nirB Rv1869c (requalified) — FAD-dependent oxidoreductase Rv1869c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.