MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2720 · 46 genes shown · anchor chiZ · open gene page → · ← back to 1 hop

Evidence: Min score 0
lexA (requalified) — transcriptional repressor LexA lexA recA (requalified) — intein-containing recombinase RecA recA chiZ (requalified) — cell wall hydrolase ChiZ chiZ nrdR (family_assigned) — transcriptional regulator NrdR nrdR dinX (requalified) — DNA polymerase IV dinX recN (requalified) — DNA repair protein RecN recN dinP (requalified) — DNA polymerase IV dinP Rv3394c (family_assigned) — DNA polymerase Y family protein Rv3394c Rv2717c (family_assigned) — FABP family protein Rv2717c Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv0052 (family_assigned) — hypothetical protein Rv0052 Rv1930c (requalified) — glutamine amidotransferase Rv1930c Rv2191 (family_assigned) — hypothetical protein Rv2191 recX (requalified) — recombination regulator RecX recX polA (requalified) — DNA polymerase I polA radA (requalified) — DNA repair protein RadA radA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 dnaN (family_assigned) — DNA polymerase III subunit beta dnaN Rv2743c (family_assigned) — hypothetical protein Rv2743c pirG (requalified) — exported repetitive protein pirG Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG thiD (requalified) — hydroxymethylpyrimidine/phosphomethylpyrimidine ki thiD cinA (requalified) — competence/damage-inducible protein A cinA lppK (family_assigned) — hypothetical protein lppK Rv3395c (family_assigned) — hypothetical protein Rv3395c tlyA (requalified) — 16S/23S rRNA (cytidine-2'-O)-methyltransferase Tly tlyA ppnK (requalified) — NAD kinase ppnK Rv1693 (dark) — hypothetical protein Rv1693 Rv1691 (family_assigned) — hypothetical protein Rv1691 Rv1692 (family_assigned) — HAD-IIA family hydrolase Rv1692 mctB (requalified) — copper transporter MctB mctB Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv3054c (requalified) — NADPH-dependent FMN reductase Rv3054c dnaE2 (requalified) — error-prone DNA polymerase dnaE2 Rv1158c (dark) — hypothetical protein Rv1158c ksgA (requalified) — 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-d ksgA erm(37) (requalified) — 23S rRNA (adenine(2058)-N(6))-methyltransferase Er erm(37) PE_PGRS37 (family_assigned) — PE-PGRS family protein PE_PGRS37 PE_PGRS37 Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c sigI (requalified) — RNA polymerase sigma factor SigI sigI virS (family_assigned) — AraC family transcriptional regulator virS Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.