MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2718c · 46 genes shown · anchor lexA · open gene page → · ← back to 1 hop

Evidence: Min score 0
nrdR (family_assigned) — transcriptional regulator NrdR nrdR lexA (requalified) — transcriptional repressor LexA lexA chiZ (requalified) — cell wall hydrolase ChiZ chiZ Rv2717c (family_assigned) — FABP family protein Rv2717c ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG thiD (requalified) — hydroxymethylpyrimidine/phosphomethylpyrimidine ki thiD cinA (requalified) — competence/damage-inducible protein A cinA polA (requalified) — DNA polymerase I polA ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ nrdH (requalified) — redoxin NrdH nrdH recA (requalified) — intein-containing recombinase RecA recA dinX (requalified) — DNA polymerase IV dinX recN (requalified) — DNA repair protein RecN recN dinP (requalified) — DNA polymerase IV dinP Rv2743c (family_assigned) — hypothetical protein Rv2743c pirG (requalified) — exported repetitive protein pirG Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c Rv1158c (dark) — hypothetical protein Rv1158c ksgA (requalified) — 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-d ksgA erm(37) (requalified) — 23S rRNA (adenine(2058)-N(6))-methyltransferase Er erm(37) PE_PGRS37 (family_assigned) — PE-PGRS family protein PE_PGRS37 PE_PGRS37 ribC (requalified) — riboflavin synthase ribC ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH Rv1722 (requalified) — biotin carboxylase Rv1722 rpe (requalified) — ribulose-phosphate 3-epimerase rpe thiE (requalified) — thiamine phosphate synthase thiE thiC (requalified) — phosphomethylpyrimidine synthase ThiC thiC Rv0421c (family_assigned) — alpha/beta family hydrolase Rv0421c thiG (requalified) — thiazole synthase thiG thiS (requalified) — sulfur carrier protein ThiS thiS rhlE (requalified) — DEAD/DEAH box helicase rhlE nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1 pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR nadC (requalified) — carboxylating nicotinate-nucleotide diphosphorylas nadC nudC (requalified) — NAD(+) diphosphatase nudC dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv1278 (family_assigned) — AAA family ATPase Rv1278

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.