MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2717c · 46 genes shown · anchor nrdR · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2717c (family_assigned) — FABP family protein Rv2717c nrdR (family_assigned) — transcriptional regulator NrdR nrdR Rv1158c (dark) — hypothetical protein Rv1158c chiZ (requalified) — cell wall hydrolase ChiZ chiZ ksgA (requalified) — 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-d ksgA erm(37) (requalified) — 23S rRNA (adenine(2058)-N(6))-methyltransferase Er erm(37) PE_PGRS37 (family_assigned) — PE-PGRS family protein PE_PGRS37 PE_PGRS37 lexA (requalified) — transcriptional repressor LexA lexA mshD (requalified) — mycothiol synthase mshD Rv3829c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3829c lipE (requalified) — lipase LipE lipE ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG thiD (requalified) — hydroxymethylpyrimidine/phosphomethylpyrimidine ki thiD cinA (requalified) — competence/damage-inducible protein A cinA Rv1157c (dark) — hypothetical protein Rv1157c gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI pimE (requalified) — mannosyltransferase pimE pirG (requalified) — exported repetitive protein pirG eno (requalified) — phosphopyruvate hydratase eno ripD (family_assigned) — NlpC/P60 family peptidoglycan-binding protein RipD ripD Rv2743c (family_assigned) — hypothetical protein Rv2743c Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c rpfB (requalified) — resuscitation-promoting factor RpfB rpfB ispE (requalified) — 4-diphosphocytidyl-2C-methyl-D-erythritol kinase ispE rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsO (requalified) — 30S ribosomal protein S15 rpsO PE_PGRS23 (family_assigned) — PE-PGRS family protein PE_PGRS23 PE_PGRS23 mesT (requalified) — epoxide hydrolase MesT mesT PE_PGRS48 (family_assigned) — PE-PGRS family protein PE_PGRS48 PE_PGRS48 PE_PGRS2 (family_assigned) — PE-PGRS family protein PE_PGRS2 PE_PGRS2 PPE35 (family_assigned) — PPE family protein PPE35 PPE35 PPE39 (family_assigned) — PPE family protein PPE39 PPE39 recA (requalified) — intein-containing recombinase RecA recA dinX (requalified) — DNA polymerase IV dinX recN (requalified) — DNA repair protein RecN recN dinP (requalified) — DNA polymerase IV dinP Rv0818 (requalified) — response regulator transcription factor Rv0818 ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c mshC (requalified) — cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D mshC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.