MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2714 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2714 (family_assigned) — PAC2 family protein Rv2714 Rv2715 (family_assigned) — alpha/beta hydrolase Rv2715 Rv2716 (family_assigned) — PhzF family phenazine biosynthesis protein Rv2716 sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 Rv3129 (family_assigned) — Conserved hypothetical protein Rv3129 Rv1321 (requalified) — endonuclease NucS Rv1321 Rv0004 (requalified) — DNA replication protein DciA Rv0004 Rv2901c (dark) — DUF2469 domain-containing protein Rv2901c Rv2712c (dark) — DUF4192 domain-containing protein Rv2712c Rv0080 (family_assigned) — pyridoxamine 5'-phosphate oxidase family protein Rv0080 Rv1875 (requalified) — PPOX class F420-dependent oxidoreductase Rv1875 mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC Rv3338 (family_assigned) — Conserved hypothetical protein Rv3338 Rv0210 (family_assigned) — hypothetical protein Rv0210 Rv1592c (family_assigned) — lipase family protein Rv1592c Rv0227c (family_assigned) — membrane protein Rv0227c Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB nadE (requalified) — NAD(+) synthase nadE cobB (requalified) — NAD-dependent protein deacylase cobB dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT pntB (family_assigned) — NAD(P)(+) transhydrogenase (Re/Si-specific) subuni pntB Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 secG (family_assigned) — preprotein translocase subunit SecG secG rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ clpS (requalified) — ATP-dependent Clp protease adapter ClpS clpS sigA (requalified) — RNA polymerase sigma factor sigA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB mdh (requalified) — malate dehydrogenase mdh papA3 (requalified) — acyltransferase PapA3 papA3 Rv3127 (requalified) — NAD(P)H nitroreductase Rv3127 papA2 (requalified) — trehalose-2-sulfate acyltransferase papA2 papA1 (requalified) — acyltransferase PapA1 papA1 Rv1322 (family_assigned) — hypothetical protein Rv1322 Rv1318c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1318c recF (requalified) — DNA replication/repair protein RecF recF dnaN (family_assigned) — DNA polymerase III subunit beta dnaN gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 Rv2256c (dark) — hypothetical protein Rv2256c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA rnhB (requalified) — ribonuclease HII rnhB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.