MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2711 · 46 genes shown · anchor sigB · open gene page → · ← back to 1 hop

Evidence: Min score 0
ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB pepD (requalified) — serine protease PepD pepD 35kd_ag (family_assigned) — hypothetical protein 35kd_ag Rv2917 (family_assigned) — hypothetical protein Rv2917 Rv2709 (dark) — DUF3099 domain-containing protein Rv2709 gltB (family_assigned) — glutamate synthase large subunit gltB Rv0082 (family_assigned) — NADH-quinone oxidoreductase subunit B family prote Rv0082 Rv3258c (dark) — hypothetical protein Rv3258c tpx (requalified) — thiol peroxidase tpx Rv2256c (dark) — hypothetical protein Rv2256c zur (requalified) — zinc uptake transcriptional repressor Zur zur furA (family_assigned) — Fur family transcriptional regulator furA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA moaB2 (family_assigned) — MogA/MoaB family molybdenum cofactor biosynthesis moaB2 mprB (requalified) — two-component system sensor histidine kinase MprB mprB mpa (requalified) — proteasome ATPase mpa htpX (requalified) — zinc metalloprotease HtpX htpX mprA (requalified) — two-component system response regulator MprA mprA clgR (family_assigned) — transcriptional regulator ClgR clgR Rv2743c (family_assigned) — hypothetical protein Rv2743c Rv2468c (requalified) — hypothetical protein Rv2468c Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c dinG (requalified) — ATP-dependent helicase DinG dinG polA (requalified) — DNA polymerase I polA Rv2033c (family_assigned) — DUF3097 domain-containing protein Rv2033c Rv2708c (family_assigned) — hypothetical protein Rv2708c Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv3909 (dark) — hypothetical protein Rv3909 Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 hycE (family_assigned) — NADH-quinone oxidoreductase subunit C hycE hycD (family_assigned) — respiratory chain complex I subunit 1 family prote hycD Rv0083 (requalified) — oxidoreductase Rv0083 hycQ (requalified) — hydrogenase HycQ hycQ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.