MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2708c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2708c (family_assigned) — hypothetical protein Rv2708c Rv2709 (dark) — DUF3099 domain-containing protein Rv2709 rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv2219 (family_assigned) — DUF4191 domain-containing protein Rv2219 Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv2731 (family_assigned) — DUF349 domain-containing protein Rv2731 Rv2696c (dark) — DUF3710 domain-containing protein Rv2696c Rv0807 (family_assigned) — sterol carrier family protein Rv0807 Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 Rv2239c (family_assigned) — hypothetical protein Rv2239c Rv3195 (requalified) — zinc-dependent metalloprotease Rv3195 Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv3909 (dark) — hypothetical protein Rv3909 Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ sigA (requalified) — RNA polymerase sigma factor sigA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2191 (family_assigned) — hypothetical protein Rv2191 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ lipB (requalified) — lipoyl(octanoyl) transferase LipB lipB lipA (requalified) — lipoyl synthase lipA Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT whiA (family_assigned) — DNA-binding protein WhiA whiA Rv2256c (dark) — hypothetical protein Rv2256c cei (requalified) — envelope integrity protein Cei cei scpA (requalified) — segregation/condensation protein A scpA Rv2730 (dark) — hypothetical protein Rv2730 Rv2698 (dark) — DUF3093 domain-containing protein Rv2698 dut (requalified) — deoxyuridine 5'-triphosphate nucleotidohydrolase dut Rv2206 (family_assigned) — DUF3043 domain-containing protein Rv2206 purF (requalified) — amidophosphoribosyltransferase purF secG (family_assigned) — preprotein translocase subunit SecG secG whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.