MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2699c · 46 genes shown · anchor rbpA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 whiA (family_assigned) — DNA-binding protein WhiA whiA Rv2239c (family_assigned) — hypothetical protein Rv2239c Rv2256c (dark) — hypothetical protein Rv2256c cei (requalified) — envelope integrity protein Cei cei Rv2731 (family_assigned) — DUF349 domain-containing protein Rv2731 Rv2708c (family_assigned) — hypothetical protein Rv2708c Rv2206 (family_assigned) — DUF3043 domain-containing protein Rv2206 clgR (family_assigned) — transcriptional regulator ClgR clgR rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA sigA (requalified) — RNA polymerase sigma factor sigA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB secG (family_assigned) — preprotein translocase subunit SecG secG whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 cuvA (requalified) — carbon utilization/virulence protein CuvA cuvA rapZ (requalified) — RNase adapter RapZ rapZ uvrC (family_assigned) — excinuclease ABC subunit UvrC uvrC xerC (requalified) — tyrosine recombinase XerC xerC ahpE (requalified) — peroxiredoxin AhpE ahpE Rv2240c (family_assigned) — hypothetical protein Rv2240c frr (requalified) — ribosome recycling factor frr Rv1626 (family_assigned) — ANTAR domain-containing response regulator Rv1626 rpsA (requalified) — 30S ribosomal protein S1 rpsA Rv2146c (family_assigned) — YggT family protein Rv2146c Rv2257c (family_assigned) — serine hydrolase domain-containing protein Rv2257c Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 Rv2033c (family_assigned) — DUF3097 domain-containing protein Rv2033c Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c scpA (requalified) — segregation/condensation protein A scpA Rv2730 (dark) — hypothetical protein Rv2730 Rv2219 (family_assigned) — DUF4191 domain-containing protein Rv2219 Rv2709 (dark) — DUF3099 domain-containing protein Rv2709 cobT (requalified) — nicotinate-nucleotide--dimethylbenzimidazole phosp cobT cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.