MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2697c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
dut (requalified) — deoxyuridine 5'-triphosphate nucleotidohydrolase dut lprE (family_assigned) — LppP/LprE family lipoprotein lprE thyA (requalified) — thymidylate synthase ThyA thyA tmk (requalified) — dTMP kinase tmk ndkA (requalified) — nucleoside-diphosphate kinase ndkA thyX (requalified) — FAD-dependent thymidylate synthase thyX dcd (requalified) — dCTP deaminase dcd Rv2698 (dark) — DUF3093 domain-containing protein Rv2698 Rv2696c (dark) — DUF3710 domain-containing protein Rv2696c lppK (family_assigned) — hypothetical protein lppK dnaN (family_assigned) — DNA polymerase III subunit beta dnaN recA (requalified) — intein-containing recombinase RecA recA dfp (requalified) — bifunctional phosphopantothenoylcysteine decarboxy dfp Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv1251c (family_assigned) — TM0106 family RecB-like putative nuclease Rv1251c polA (requalified) — DNA polymerase I polA deaD (requalified) — DEAD/DEAH box helicase deaD Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c dfrA (requalified) — dihydrofolate reductase dfrA folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD glyA1 (requalified) — serine hydroxymethyltransferase glyA1 nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsO (requalified) — 30S ribosomal protein S15 rpsO rpsB (requalified) — 30S ribosomal protein S2 rpsB rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsP (requalified) — 30S ribosomal protein S16 rpsP glyA2 (requalified) — serine hydroxymethyltransferase glyA2 purN (requalified) — phosphoribosylglycinamide formyltransferase purN pyrG (requalified) — CTP synthase pyrG Rv0320 (family_assigned) — hypothetical protein Rv0320 rmlD (requalified) — dTDP-4-dehydrorhamnose reductase rmlD udgA (family_assigned) — UDP-glucose/GDP-mannose dehydrogenase family prote udgA Rv2235 (family_assigned) — SURF1 family protein Rv2235 eccB4 (family_assigned) — type VII secretion system ESX-4 subunit EccB4 eccB4 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 Rv0948c (requalified) — chorismate mutase Rv0948c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 Rv2708c (family_assigned) — hypothetical protein Rv2708c Rv2090 (requalified) — 5'-3' exonuclease Rv2090 dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA helZ (requalified) — DEAD/DEAH box helicase helZ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.