MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2688c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2688c (family_assigned) — ABC transporter ATP-binding protein Rv2688c Rv2686c (family_assigned) — fluoroquinolones efflux ABC transporter permease Rv2686c Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c Rv1272c (family_assigned) — fatty acid ABC transporter ATP-binding protein/per Rv1272c irtB (family_assigned) — iron ABC transporter ATP-binding protein/permease irtB irtA (family_assigned) — iron ABC transporter ATP-binding protein/permease irtA Rv0194 (family_assigned) — ABC transporter ATP-binding protein Rv0194 Rv1273c (family_assigned) — ABC transporter ATP-binding protein Rv1273c Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD Rv2689c (requalified) — class I SAM-dependent RNA methyltransferase Rv2689c Rv0210 (family_assigned) — hypothetical protein Rv0210 rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv0955 (family_assigned) — DUF6350 family protein Rv0955 lprC (family_assigned) — DUF3558 domain-containing protein lprC lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv1218c (family_assigned) — multidrug efflux ABC transporter ATP-binding prote Rv1218c Rv0435c (family_assigned) — AAA family ATPase Rv0435c eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 mbtE (requalified) — peptide synthetase mbtE mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG mbtA (requalified) — bifunctional salicyl-AMP ligase/salicyl-S-ArCP syn mbtA dnaK (requalified) — molecular chaperone DnaK dnaK Rv3402c (family_assigned) — DegT/DnrJ/EryC1/StrS family aminotransferase Rv3402c mbtB (requalified) — phenyloxazoline synthase MbtB mbtB mbtI (requalified) — salicylate synthase mbtI Rv0193c (family_assigned) — hypothetical protein Rv0193c Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv0195 (requalified) — response regulator transcription factor Rv0195 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr virS (family_assigned) — AraC family transcriptional regulator virS Rv0603 (family_assigned) — hypothetical protein Rv0603 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c Rv3840 (family_assigned) — transcriptional regulator Rv3840 cobB (requalified) — NAD-dependent protein deacylase cobB Rv1176c (family_assigned) — PadR family transcriptional regulator Rv1176c Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR mftR (family_assigned) — mycofactocin system transcriptional regulator mftR atpB (family_assigned) — F0F1 ATP synthase subunit A atpB atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.