MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2670c · 46 genes shown · anchor ribD · open gene page → · ← back to 1 hop

Evidence: Min score 0
zapE (requalified) — cell division protein ZapE zapE ribD (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribD Rv1382 (requalified) — transporter Rv1382 sdhD (family_assigned) — succinate dehydrogenase hydrophobic membrane ancho sdhD sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC sdhB (family_assigned) — succinate dehydrogenase iron-sulfur subunit sdhB Rv2772c (family_assigned) — hypothetical protein Rv2772c sdhA (family_assigned) — succinate dehydrogenase flavoprotein subunit sdhA aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv2672 (requalified) — alpha/beta fold hydrolase Rv2672 Rv0194 (family_assigned) — ABC transporter ATP-binding protein Rv0194 Rv2052c (requalified) — amidohydrolase Rv2052c msrB (requalified) — peptide-methionine (R)-S-oxide reductase MsrB msrB ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 ribC (requalified) — riboflavin synthase ribC carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB pyrC (requalified) — dihydroorotase pyrC carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA pyrB (family_assigned) — aspartate carbamoyltransferase catalytic subunit pyrB pyrF (requalified) — orotidine-5'-phosphate decarboxylase pyrF pyrR (family_assigned) — bifunctional pyr operon transcriptional regulator/ pyrR frdB (family_assigned) — succinate dehydrogenase iron-sulfur subunit frdB frdA (family_assigned) — fumarate reductase (quinol) flavoprotein subunit frdA Rv0247c (family_assigned) — succinate dehydrogenase/fumarate reductase iron-su Rv0247c Rv0248c (family_assigned) — fumarate reductase/succinate dehydrogenase flavopr Rv0248c sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC dapB (requalified) — 4-hydroxy-tetrahydrodipicolinate reductase dapB Rv2771c (family_assigned) — flavodoxin family protein Rv2771c fum (requalified) — class II fumarate hydratase fum aftD (family_assigned) — DUF3367 domain-containing protein aftD embA (requalified) — arabinosyltransferase EmbA embA aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB embB (requalified) — arabinosyltransferase EmbB embB lprC (family_assigned) — DUF3558 domain-containing protein lprC Rv3035 (family_assigned) — hypothetical protein Rv3035 lmeA (requalified) — mannan chain length control protein LmeA lmeA lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv0193c (family_assigned) — hypothetical protein Rv0193c Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv0195 (requalified) — response regulator transcription factor Rv0195 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr virS (family_assigned) — AraC family transcriptional regulator virS Rv0603 (family_assigned) — hypothetical protein Rv0603 fxsA (family_assigned) — FxsA family protein fxsA ppm1 (requalified) — apolipoprotein N-acyltransferase ppm1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.