MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2669 · 45 genes shown · anchor trmD · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2669 (requalified) — N-acetyltransferase Rv2669 Rv2668 (family_assigned) — hypothetical protein Rv2668 trmD (requalified) — tRNA (guanosine(37)-N1)-methyltransferase TrmD trmD clpC2 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC2 Rv2803 (family_assigned) — hypothetical protein Rv2803 Rv0918 (family_assigned) — DUF1778 domain-containing protein Rv0918 tsaB (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaB Rv3225c (family_assigned) — bifunctional GNAT family N-acetyltransferase/amino Rv3225c bioF1 (requalified) — 8-amino-7-oxononanoate synthase bioF1 argA (requalified) — amino-acid N-acetyltransferase argA Rv3027c (family_assigned) — GNAT family N-acetyltransferase Rv3027c nat (requalified) — arylamine N-acetyltransferase nat rimM (requalified) — ribosome maturation factor RimM rimM rpsP (requalified) — 30S ribosomal protein S16 rpsP atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH rplS (requalified) — 50S ribosomal protein L19 rplS rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA nusA (requalified) — transcription termination factor NusA nusA clpS (requalified) — ATP-dependent Clp protease adapter ClpS clpS Rv2264c (family_assigned) — Hsp70 family protein Rv2264c Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c dnaK (requalified) — molecular chaperone DnaK dnaK Rv0312 (family_assigned) — Hsp70 family protein Rv0312 Rv2802c (dark) — DUF2293 domain-containing protein Rv2802c Rv0919 (family_assigned) — GNAT family N-acetyltransferase Rv0919 mazF9 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF9 mazE9 (requalified) — antitoxin MazE9 mazE9 Rv0133 (family_assigned) — GNAT family N-acetyltransferase Rv0133 vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 Rv2775 (requalified) — GCN5-like N-acetyltransferase Rv2775 wbbL2 (family_assigned) — glycosyltransferase family 2 protein wbbL2 Rv2170 (requalified) — N-acetyltransferase Rv2170 tsaE (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaE gcp (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera gcp rimI (requalified) — ribosomal protein S18-alanine N-acetyltransferase rimI alr (requalified) — alanine racemase alr birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c pks1 (requalified) — polyketide synthase pks1 mas (requalified) — mycocerosate synthase mas pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 bioA (requalified) — adenosylmethionine--8-amino-7-oxononanoate transam bioA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.