MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2658c · 32 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2658c (family_assigned) — hypothetical protein Rv2658c Rv2659c (requalified) — tyrosine-type recombinase/integrase Rv2659c Rv2657c (family_assigned) — helix-turn-helix domain-containing protein Rv2657c Rv2655c (family_assigned) — DUF3631 domain-containing protein Rv2655c Rv2654c (requalified) — type II toxin-antitoxin system antitoxin Rv2654c Rv2656c (dark) — DUF2742 domain-containing protein Rv2656c Rv2653c (requalified) — type II toxin-antitoxin system toxin Rv2653c Rv2661c (dark) — hypothetical protein Rv2661c Rv2660c (dark) — hypothetical protein Rv2660c Rv2652c (requalified) — prophage protein Rv2652c lysE (requalified) — L-lysine exporter lysE Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1 Rv2662 (dark) — hypothetical protein Rv2662 Rv2651c (family_assigned) — HK97 family phage prohead protease Rv2651c Rv2650c (requalified) — phage major capsid protein Rv2650c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c lrpA (family_assigned) — transcriptional regulator LrpA lrpA Rv1404 (family_assigned) — MarR family transcriptional regulator Rv1404 Rv1979c (family_assigned) — APC family permease Rv1979c Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c Rv2686c (family_assigned) — fluoroquinolones efflux ABC transporter permease Rv2686c rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv0210 (family_assigned) — hypothetical protein Rv0210 pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ nrdI (requalified) — class Ib ribonucleoside-diphosphate reductase asse nrdI nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 tmk (requalified) — dTMP kinase tmk cmk (requalified) — (d)CMP kinase cmk

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.