MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2645 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2645 (family_assigned) — hypothetical protein Rv2645 Rv2646 (requalified) — tyrosine-type recombinase/integrase Rv2646 Rv2647 (requalified) — hypothetical protein Rv2647 Rv2661c (dark) — hypothetical protein Rv2661c Rv1573 (dark) — hypothetical protein Rv1573 mhpE (requalified) — 4-hydroxy-2-oxovalerate aldolase mhpE Rv2738c (family_assigned) — DUF3046 domain-containing protein Rv2738c Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c lppO (requalified) — lipoprotein LpqH lppO Rv1255c (family_assigned) — helix-turn-helix domain-containing protein Rv1255c Rv2650c (requalified) — phage major capsid protein Rv2650c Rv2659c (requalified) — tyrosine-type recombinase/integrase Rv2659c TB7.3 (requalified) — biotin/lipoyl-binding carrier protein TB7.3 xerC (requalified) — tyrosine recombinase XerC xerC ftsK (requalified) — DNA translocase FtsK ftsK tyrA (requalified) — prephenate dehydrogenase TyrA tyrA Rv3242c (family_assigned) — ComF family protein Rv3242c parA (requalified) — chromosome partitioning protein ParA parA Rv1708 (requalified) — initiation inhibitor protein Rv1708 Rv3213c (family_assigned) — AAA family ATPase Rv3213c gid (requalified) — 16S rRNA (guanine(527)-N(7))-methyltransferase Rsm gid Rv2660c (dark) — hypothetical protein Rv2660c Rv2662 (dark) — hypothetical protein Rv2662 Rv2658c (family_assigned) — hypothetical protein Rv2658c Rv2657c (family_assigned) — helix-turn-helix domain-containing protein Rv2657c Rv2655c (family_assigned) — DUF3631 domain-containing protein Rv2655c Rv1572c (dark) — Conserved hypothetical protein Rv1572c Rv1574 (requalified) — phage protein Rv1574 Rv1575 (requalified) — phage protein Rv1575 ilvB2 (family_assigned) — thiamine pyrophosphate-binding protein ilvB2 hsaG (requalified) — acetaldehyde dehydrogenase (acetylating) hsaG hsaE (requalified) — 2-keto-4-pentenoate hydratase hsaE hsaF (requalified) — 4-hydroxy-2-oxovalerate aldolase hsaF Rv3468c (requalified) — dTDP-glucose 4,6-dehydratase Rv3468c leuB (requalified) — 3-isopropylmalate dehydrogenase leuB Rv2739c (requalified) — glycosyltransferase Rv2739c ephG (requalified) — epoxide hydrolase ephG recX (requalified) — recombination regulator RecX recX recA (requalified) — intein-containing recombinase RecA recA whiB3 (family_assigned) — redox-responsive transcriptional regulator WhiB3 whiB3 Rv0880 (family_assigned) — MarR family transcriptional regulator Rv0880 nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.