MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2608 · 42 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE42 (family_assigned) — PPE family protein PPE42 PPE42 Rv2209 (requalified) — MFS transporter Rv2209 Rv1004c (family_assigned) — hypothetical protein Rv1004c PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PE_PGRS15 (family_assigned) — PE-PGRS family protein PE_PGRS15 PE_PGRS15 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 mmpL7 (requalified) — phthiocerol dimycocerosate RND transporter MmpL7 mmpL7 espK (family_assigned) — ESX-1 secretion-associated protein EspK espK Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 iniB (requalified) — isoniazid-induced protein IniB iniB PE_PGRS48 (family_assigned) — PE-PGRS family protein PE_PGRS48 PE_PGRS48 Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 rplD (requalified) — 50S ribosomal protein L4 rplD ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY rpsB (requalified) — 30S ribosomal protein S2 rpsB rplJ (requalified) — 50S ribosomal protein L10 rplJ rplX (requalified) — 50S ribosomal protein L24 rplX rplW (requalified) — 50S ribosomal protein L23 rplW PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 fadD28 (requalified) — fatty-acid--AMP ligase FAAL28/FadD28 fadD28 lppX (requalified) — LppX_LprAFG lipoprotein lppX espB (requalified) — type VII secretion system ESX-1 target EspB espB eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 Rv2086 (family_assigned) — hypothetical protein Rv2086 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 Rv2083 (dark) — hypothetical protein Rv2083 Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv2084 (dark) — hypothetical protein Rv2084 iniA (requalified) — isoniazid inductible protein IniA iniA iniC (requalified) — isoniazid-induced dynamin-like GTPase IniC iniC PPE40 (family_assigned) — PPE family protein PPE40 PPE40 PPE24 (family_assigned) — PPE family protein PPE24 PPE24 Rv2955c (requalified) — [2-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-r Rv2955c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.