MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2601A · 46 genes shown · anchor vapC41 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB41 (requalified) — antitoxin VapB41 vapB41 vapC41 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC41 Rv2600 (family_assigned) — integral membrane protein Rv2600 speE (requalified) — spermidine synthase speE vapC17 (family_assigned) — PIN domain-containing protein vapC17 Rv0229c (family_assigned) — PIN domain nuclease Rv0229c vapC15 (family_assigned) — PIN domain nuclease vapC15 vapC2 (family_assigned) — PIN domain nuclease vapC2 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapC10 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC10 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapC21 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC21 vapC6 (requalified) — ribonuclease VapC6 vapC6 vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapC22 (family_assigned) — PIN domain-containing protein vapC22 Rv2597 (dark) — DUF4178 domain-containing protein Rv2597 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 Rv2599 (family_assigned) — DUF4247 domain-containing protein Rv2599 ruvA (requalified) — Holliday junction branch migration protein RuvA ruvA ruvC (requalified) — crossover junction endodeoxyribonuclease RuvC ruvC Rv0535 (requalified) — 5'-methylthioadenosine phosphorylase Rv0535 mtn (requalified) — 5'-methylthioadenosine/adenosylhomocysteine nucleo mtn vapB17 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB17 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 vapB14 (requalified) — antitoxin vapB14 glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS vapC20 (requalified) — type II toxin-antitoxin system toxin 23S rRNA-spec vapC20 php (requalified) — phosphotriesterase-related protein php fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 chaA (requalified) — calcium:proton antiporter chaA vapB15 (requalified) — antitoxin VapB15 vapB15 vapB11 (requalified) — antitoxin VapB11 vapB11 Rv2008c (family_assigned) — hypothetical protein Rv2008c vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298 Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0303 (requalified) — protochlorophyllide reductase Rv0303 PE_PGRS5 (family_assigned) — PE-PGRS family protein PE_PGRS5 PE_PGRS5 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 Rv0597c (family_assigned) — ATP-binding protein Rv0597c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.