MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2600 · 46 genes shown · anchor speE · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2600 (family_assigned) — integral membrane protein Rv2600 speE (requalified) — spermidine synthase speE Rv2597 (dark) — DUF4178 domain-containing protein Rv2597 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 Rv2599 (family_assigned) — DUF4247 domain-containing protein Rv2599 ruvA (requalified) — Holliday junction branch migration protein RuvA ruvA ruvC (requalified) — crossover junction endodeoxyribonuclease RuvC ruvC vapC41 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC41 vapB41 (requalified) — antitoxin VapB41 vapB41 Rv1417 (family_assigned) — PH domain-containing protein Rv1417 Rv1638A (family_assigned) — hypothetical protein Rv1638A Rv3662c (requalified) — oxidoreductase Rv3662c fdxD (requalified) — ferredoxin fdxD Rv0535 (requalified) — 5'-methylthioadenosine phosphorylase Rv0535 mtn (requalified) — 5'-methylthioadenosine/adenosylhomocysteine nucleo mtn Rv1006 (family_assigned) — hypothetical protein Rv1006 Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 vapC40 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC40 vapB40 (family_assigned) — AbrB/MazE/SpoVT family DNA-binding domain-containi vapB40 ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c Rv2897c (family_assigned) — YifB family Mg chelatase-like AAA ATPase Rv2897c recX (requalified) — recombination regulator RecX recX Rv2898c (family_assigned) — YraN family protein Rv2898c vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapC22 (family_assigned) — PIN domain-containing protein vapC22 vapC17 (family_assigned) — PIN domain-containing protein vapC17 Rv0229c (family_assigned) — PIN domain nuclease Rv0229c vapC15 (family_assigned) — PIN domain nuclease vapC15 ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH lprH (family_assigned) — hypothetical protein lprH mihF (requalified) — integration host factor MihF mihF rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL Rv1639c (family_assigned) — alpha/beta hydrolase family protein Rv1639c Rv2468c (requalified) — hypothetical protein Rv2468c Rv3205c (family_assigned) — hypothetical protein Rv3205c Rv2474c (family_assigned) — hypothetical protein Rv2474c Rv1083 (dark) — hypothetical protein Rv1083 cei (requalified) — envelope integrity protein Cei cei dppD (family_assigned) — ABC transporter ATP-binding protein dppD dppC (family_assigned) — dipeptide ABC transporter permease DppC dppC dppB (family_assigned) — ABC transporter permease dppB dppA (family_assigned) — ABC transporter substrate-binding protein dppA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.