MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2599 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2599 (family_assigned) — DUF4247 domain-containing protein Rv2599 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 Rv2597 (dark) — DUF4178 domain-containing protein Rv2597 Rv2600 (family_assigned) — integral membrane protein Rv2600 speE (requalified) — spermidine synthase speE vapC40 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC40 vapB40 (family_assigned) — AbrB/MazE/SpoVT family DNA-binding domain-containi vapB40 Rv3717 (family_assigned) — hypothetical protein Rv3717 yrbE4B (family_assigned) — ABC transporter permease yrbE4B yrbE4A (family_assigned) — ABC transporter permease yrbE4A Rv0071 (family_assigned) — reverse transcriptase domain-containing protein Rv0071 ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 fadE27 (family_assigned) — acyl-CoA dehydrogenase family protein fadE27 Rv1006 (family_assigned) — hypothetical protein Rv1006 Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 ruvA (requalified) — Holliday junction branch migration protein RuvA ruvA ruvC (requalified) — crossover junction endodeoxyribonuclease RuvC ruvC Rv0535 (requalified) — 5'-methylthioadenosine phosphorylase Rv0535 mtn (requalified) — 5'-methylthioadenosine/adenosylhomocysteine nucleo mtn ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3915 (requalified) — peptidoglycan hydrolase Rv3915 Rv0063 (requalified) — FAD-binding oxidoreductase Rv0063 Rv3209 (family_assigned) — MmpS family transport accessory protein Rv3209 Rv3096 (requalified) — 1%2C4-beta-xylanase Rv3096 Rv3716c (family_assigned) — YbaB/EbfC family nucleoid-associated protein Rv3716c recR (requalified) — recombination mediator RecR recR mkl (family_assigned) — ABC transporter ATP-binding protein mkl mce4A (family_assigned) — Mce family protein Mce4A mce4A mce4C (family_assigned) — virulence factor Mce family protein mce4C mce4B (family_assigned) — virulence factor Mce family protein mce4B mce4D (family_assigned) — virulence factor Mce family protein mce4D lprN (family_assigned) — Mce family lipoprotein LprN lprN mce4F (family_assigned) — virulence factor Mce family protein mce4F cas2 (requalified) — CRISPR-associated endonuclease Cas2 cas2 Rv3428c (requalified) — transposase Rv3428c Rv2424c (requalified) — transposase Rv2424c Rv2177c (requalified) — transposase Rv2177c istB (family_assigned) — IS21-like element ISMt2 family helper ATPase IstB istB Rv2944 (requalified) — insertion sequence element IS1533 transposase Rv2944 ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH ribC (requalified) — riboflavin synthase ribC Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 Rv1939 (family_assigned) — flavin reductase family protein Rv1939 ephB (requalified) — epoxide hydrolase EphB ephB fadE26 (requalified) — acyl-CoA dehydrogenase fadE26

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.