MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2596 · 46 genes shown · anchor vapB40 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC40 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC40 vapB40 (family_assigned) — AbrB/MazE/SpoVT family DNA-binding domain-containi vapB40 Rv2597 (dark) — DUF4178 domain-containing protein Rv2597 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB ruvA (requalified) — Holliday junction branch migration protein RuvA ruvA ruvC (requalified) — crossover junction endodeoxyribonuclease RuvC ruvC Rv2599 (family_assigned) — DUF4247 domain-containing protein Rv2599 speE (requalified) — spermidine synthase speE vapC15 (family_assigned) — PIN domain nuclease vapC15 vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 vapC29 (requalified) — type II toxin-antitoxin system ribonuclease VapC29 vapC29 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 Rv2600 (family_assigned) — integral membrane protein Rv2600 Rv1006 (family_assigned) — hypothetical protein Rv1006 Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 ligA (requalified) — NAD-dependent DNA ligase LigA ligA clpB (requalified) — chaperone protein ClpB clpB polA (requalified) — DNA polymerase I polA Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c Rv2897c (family_assigned) — YifB family Mg chelatase-like AAA ATPase Rv2897c recX (requalified) — recombination regulator RecX recX Rv2898c (family_assigned) — YraN family protein Rv2898c Rv0535 (requalified) — 5'-methylthioadenosine phosphorylase Rv0535 mtn (requalified) — 5'-methylthioadenosine/adenosylhomocysteine nucleo mtn vapB15 (requalified) — antitoxin VapB15 vapB15 vapB11 (requalified) — antitoxin VapB11 vapB11 Rv2008c (family_assigned) — hypothetical protein Rv2008c vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 Rv3677c (requalified) — MBL fold metallo-hydrolase Rv3677c Rv2531c (requalified) — amino acid decarboxylase Rv2531c ilvA (requalified) — threonine ammonia-lyase ilvA vapB29 (requalified) — antitoxin VapB29 vapB29 Rv0616c (dark) — Hypothetical protein Rv0616c galTa (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTa galTb (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTb Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 galK (requalified) — galactokinase galK vapB9 (requalified) — antitoxin VapB9 vapB9 vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3 Rv3098A (family_assigned) — PemK-like protein Rv3098A Rv0959 (family_assigned) — VWA domain-containing protein Rv0959 Rv0958 (family_assigned) — ATP-binding protein Rv0958 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.