MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2594c · 45 genes shown · anchor ruvA · open gene page → · ← back to 1 hop

Evidence: Min score 0
ruvC (requalified) — crossover junction endodeoxyribonuclease RuvC ruvC ruvA (requalified) — Holliday junction branch migration protein RuvA ruvA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv2897c (family_assigned) — YifB family Mg chelatase-like AAA ATPase Rv2897c recX (requalified) — recombination regulator RecX recX Rv2898c (family_assigned) — YraN family protein Rv2898c Rv2600 (family_assigned) — integral membrane protein Rv2600 vapC40 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC40 def (requalified) — peptide deformylase def vapB40 (family_assigned) — AbrB/MazE/SpoVT family DNA-binding domain-containi vapB40 Rv2926c (family_assigned) — hypothetical protein Rv2926c Rv2603c (family_assigned) — YebC/PmpR family DNA-binding transcriptional regul Rv2603c secF (family_assigned) — protein translocase subunit SecF secF Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c ligA (requalified) — NAD-dependent DNA ligase LigA ligA clpB (requalified) — chaperone protein ClpB clpB polA (requalified) — DNA polymerase I polA dprA (requalified) — DNA-processing protein DprA dprA viuB (requalified) — siderophore-interacting protein viuB fdhD (requalified) — formate dehydrogenase accessory sulfurtransferase fdhD Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv2414c (family_assigned) — ComEC/Rec2 family competence protein Rv2414c recA (requalified) — intein-containing recombinase RecA recA radA (requalified) — DNA repair protein RadA radA Rv2735c (requalified) — three-Cys-motif partner protein TcmP Rv2735c thiL (requalified) — thiamine-phosphate kinase thiL Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c speE (requalified) — spermidine synthase speE Rv2597 (dark) — DUF4178 domain-containing protein Rv2597 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 Rv2599 (family_assigned) — DUF4247 domain-containing protein Rv2599 rplU (requalified) — 50S ribosomal protein L21 rplU tig (requalified) — trigger factor tig rplV (requalified) — 50S ribosomal protein L22 rplV rplI (requalified) — 50S ribosomal protein L9 rplI rplQ (requalified) — 50S ribosomal protein L17 rplQ rplD (requalified) — 50S ribosomal protein L4 rplD rnc (requalified) — ribonuclease III rnc rpsC (requalified) — 30S ribosomal protein S3 rpsC rpmF (requalified) — 50S ribosomal protein L32 rpmF rplK (requalified) — 50S ribosomal protein L11 rplK rplA (requalified) — 50S ribosomal protein L1 rplA rpmI (requalified) — 50S ribosomal protein L35 rpmI tesB2 (requalified) — acyl-CoA thioesterase II tesB2 snoP (family_assigned) — pyridoxal 5'-phosphate synthase glutaminase subuni snoP

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.