MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2593c · 46 genes shown · anchor ruvB · open gene page → · ← back to 1 hop

Evidence: Min score 0
ruvA (requalified) — Holliday junction branch migration protein RuvA ruvA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB ruvC (requalified) — crossover junction endodeoxyribonuclease RuvC ruvC Rv2600 (family_assigned) — integral membrane protein Rv2600 vapC40 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC40 vapB40 (family_assigned) — AbrB/MazE/SpoVT family DNA-binding domain-containi vapB40 Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c cinA (requalified) — competence/damage-inducible protein A cinA recA (requalified) — intein-containing recombinase RecA recA uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 recN (requalified) — DNA repair protein RecN recN adnA (requalified) — ATP-dependent DNA helicase AdnA adnA pth (requalified) — aminoacyl-tRNA hydrolase pth ligA (requalified) — NAD-dependent DNA ligase LigA ligA clpB (requalified) — chaperone protein ClpB clpB polA (requalified) — DNA polymerase I polA Rv2897c (family_assigned) — YifB family Mg chelatase-like AAA ATPase Rv2897c recX (requalified) — recombination regulator RecX recX Rv2898c (family_assigned) — YraN family protein Rv2898c speE (requalified) — spermidine synthase speE Rv2597 (dark) — DUF4178 domain-containing protein Rv2597 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 Rv2599 (family_assigned) — DUF4247 domain-containing protein Rv2599 Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 Rv3672c (requalified) — CoA pyrophosphatase Rv3672c Rv2609c (family_assigned) — NUDIX domain-containing protein Rv2609c rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD gadB (requalified) — glutamate decarboxylase gadB nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1 pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR nadC (requalified) — carboxylating nicotinate-nucleotide diphosphorylas nadC nudC (requalified) — NAD(+) diphosphatase nudC lexA (requalified) — transcriptional repressor LexA lexA radA (requalified) — DNA repair protein RadA radA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 dnaN (family_assigned) — DNA polymerase III subunit beta dnaN adnB (requalified) — ATP-dependent DNA helicase AdnB adnB uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB tlyA (requalified) — 16S/23S rRNA (cytidine-2'-O)-methyltransferase Tly tlyA ppnK (requalified) — NAD kinase ppnK Rv1693 (dark) — hypothetical protein Rv1693 Rv1691 (family_assigned) — hypothetical protein Rv1691

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.