MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2581c · 46 genes shown · anchor hisS · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2581c (requalified) — MBL fold metallo-hydrolase Rv2581c hisS (requalified) — histidine--tRNA ligase hisS ppiB (requalified) — peptidyl-prolyl cis-trans isomerase B ppiB Rv0331 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0331 truA (requalified) — tRNA pseudouridine synthase A truA rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH Rv2367c (requalified) — endoribonuclease Rv2367c Rv0390 (family_assigned) — rhodanese-like domain-containing protein Rv0390 Rv1066 (family_assigned) — rhodanese-like domain-containing protein Rv1066 Rv2047c (family_assigned) — sugar epimerase family protein Rv2047c Rv1672c (requalified) — MFS transporter Rv1672c aspS (requalified) — aspartate--tRNA ligase aspS hisG (requalified) — ATP phosphoribosyltransferase hisG valS (requalified) — valine--tRNA ligase valS gcpE (requalified) — flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-e gcpE pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks12 (requalified) — type I polyketide synthase pks12 htpG (requalified) — molecular chaperone HtpG htpG sirA (requalified) — sulfite reductase sirA metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ metB (requalified) — cystathionine gamma-synthase metB Rv3684 (requalified) — lyase Rv3684 cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 aao (requalified) — FAD-dependent oxidoreductase aao rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rplQ (requalified) — 50S ribosomal protein L17 rplQ rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsM (requalified) — 30S ribosomal protein S13 rpsM truB (requalified) — tRNA pseudouridine(55) synthase TruB truB mraZ (requalified) — division/cell wall cluster transcriptional repress mraZ pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB Rv2164c (family_assigned) — hypothetical protein Rv2164c rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsP (requalified) — 30S ribosomal protein S16 rpsP rpsF (requalified) — 30S ribosomal protein S6 rpsF phoH1 (requalified) — phosphate starvation-inducible protein PhoH phoH1 Rv2366c (family_assigned) — hemolysin family protein Rv2366c Rv2365c (requalified) — cytidine deaminase Rv2365c era (requalified) — GTPase Era era sodA (requalified) — superoxide dismutase sodA purT (requalified) — phosphoribosylglycinamide formyltransferase 2 purT rplM (requalified) — 50S ribosomal protein L13 rplM

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.