MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2560 · 46 genes shown · anchor papA2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2560 (family_assigned) — DUF2189 domain-containing protein Rv2560 Rv2559c (requalified) — replication-associated recombination protein A Rv2559c papA2 (requalified) — trehalose-2-sulfate acyltransferase papA2 papA3 (requalified) — acyltransferase PapA3 papA3 papA1 (requalified) — acyltransferase PapA1 papA1 Rv2566 (family_assigned) — hypothetical protein Rv2566 Rv2567 (requalified) — circularly permuted type 2 ATP-grasp protein Rv2567 Rv2923c (family_assigned) — OsmC family protein Rv2923c ptrp (family_assigned) — hypothetical protein ptrp Rv0523c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv0523c drrB (family_assigned) — daunorubicin ABC transporter permease DrrB drrB cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c nadE (requalified) — NAD(+) synthase nadE cysG (requalified) — uroporphyrinogen-III C-methyltransferase cysG pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT lppK (family_assigned) — hypothetical protein lppK pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks12 (requalified) — type I polyketide synthase pks12 pks13 (requalified) — polyketide synthase Pks13 pks13 pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 mmpL10 (requalified) — RND transporter MmpL10 mmpL10 pks3 (requalified) — polyketide beta-ketoacyl synthase pks3 mmpL8 (requalified) — sulfolipid-1 RND transporter MmpL8 mmpL8 Rv2411c (requalified) — circularly permuted type 2 ATP-grasp protein Rv2411c Rv2568c (family_assigned) — putative zinc-binding metallopeptidase Rv2568c Rv2565 (family_assigned) — patatin-like phospholipase family protein Rv2565 Rv2410c (family_assigned) — alpha-E domain-containing protein Rv2410c Rv2409c (family_assigned) — transglutaminase family protein Rv2409c Rv2569c (family_assigned) — transglutaminase family protein Rv2569c acyP (requalified) — acylphosphatase acyP smc (requalified) — chromosome segregation protein SMC smc ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY fpg (requalified) — DNA-formamidopyrimidine glycosylase fpg sepIVA (requalified) — cell division protein SepIVA sepIVA rnc (requalified) — ribonuclease III rnc Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv1775 (family_assigned) — hypothetical protein Rv1775 Rv3909 (dark) — hypothetical protein Rv3909 hemL (requalified) — glutamate-1-semialdehyde 2%2C1-aminomutase hemL Rv0525 (family_assigned) — histidine phosphatase family protein Rv0525

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.