MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2556c · 27 genes shown · anchor alaS · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2556c (requalified) — secondary thiamine-phosphate synthase enzyme YjbQ Rv2556c alaS (requalified) — alanine--tRNA ligase alaS ruvX (requalified) — Holliday junction resolvase RuvX ruvX mltG (requalified) — endolytic transglycosylase MltG mltG aroE (requalified) — shikimate dehydrogenase aroE Rv2551c (family_assigned) — A24 family peptidase Rv2551c Rv2557 (family_assigned) — hypothetical protein Rv2557 Rv2558 (family_assigned) — hypothetical protein Rv2558 aroF (requalified) — chorismate synthase aroF Rv1691 (family_assigned) — hypothetical protein Rv1691 Rv3529c (requalified) — TLR2-mediated response inhibitor Rv3529c Rv2267c (requalified) — sulfotransferase Rv2267c Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 eccE5 (family_assigned) — type VII secretion system ESX-5 subunit EccE5 eccE5 aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA aroB (requalified) — 3-dehydroquinate synthase aroB aroK (requalified) — shikimate kinase AroK aroK aroD (requalified) — type II 3-dehydroquinate dehydratase aroD dprA (requalified) — DNA-processing protein DprA dprA Rv2302 (family_assigned) — DUF1918 domain-containing protein Rv2302 Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv2160c (family_assigned) — Conserved hypothetical protein Rv2160c Rv3481c (family_assigned) — GAP family protein Rv3481c Rv2160A (family_assigned) — Conserved hypothetical protein Rv2160A Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c Rv0948c (requalified) — chorismate mutase Rv0948c Rv1885c (requalified) — chorismate mutase Rv1885c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.