MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2554c · 46 genes shown · anchor alaS · open gene page → · ← back to 1 hop

Evidence: Min score 0
ruvX (requalified) — Holliday junction resolvase RuvX ruvX alaS (requalified) — alanine--tRNA ligase alaS aroE (requalified) — shikimate dehydrogenase aroE mltG (requalified) — endolytic transglycosylase MltG mltG Rv2551c (family_assigned) — A24 family peptidase Rv2551c Rv2556c (requalified) — secondary thiamine-phosphate synthase enzyme YjbQ Rv2556c Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 aroD (requalified) — type II 3-dehydroquinate dehydratase aroD aroK (requalified) — shikimate kinase AroK aroK aroF (requalified) — chorismate synthase aroF miaA (requalified) — tRNA (adenosine(37)-N6)-dimethylallyltransferase M miaA Rv2557 (family_assigned) — hypothetical protein Rv2557 apt (requalified) — adenine phosphoribosyltransferase apt Rv1691 (family_assigned) — hypothetical protein Rv1691 Rv3529c (requalified) — TLR2-mediated response inhibitor Rv3529c Rv2267c (requalified) — sulfotransferase Rv2267c aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA aroB (requalified) — 3-dehydroquinate synthase aroB eccE5 (family_assigned) — type VII secretion system ESX-5 subunit EccE5 eccE5 dprA (requalified) — DNA-processing protein DprA dprA nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR mbtI (requalified) — salicylate synthase mbtI entC (requalified) — isochorismate synthase entC Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c Rv0948c (requalified) — chorismate mutase Rv0948c Rv1885c (requalified) — chorismate mutase Rv1885c Rv2728c (family_assigned) — hypothetical protein Rv2728c hflX (family_assigned) — GTP-binding protein HflX hflX dapF (requalified) — diaminopimelate epimerase dapF miaB (requalified) — tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiot miaB pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH Rv2558 (family_assigned) — hypothetical protein Rv2558 Rv2302 (family_assigned) — DUF1918 domain-containing protein Rv2302 Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv2160c (family_assigned) — Conserved hypothetical protein Rv2160c Rv3481c (family_assigned) — GAP family protein Rv3481c guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA purB (requalified) — adenylosuccinate lyase purB purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH gmk (requalified) — guanylate kinase gmk

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.