MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2550c · 43 genes shown · anchor vapC20 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB20 (requalified) — type II toxin-antitoxin system antitoxin VapB20 vapB20 vapC20 (requalified) — type II toxin-antitoxin system toxin 23S rRNA-spec vapC20 Rv2548A (dark) — hypothetical protein Rv2548A vapB38 (requalified) — antitoxin vapB38 vapB19 (family_assigned) — CopG family transcriptional regulator vapB19 Rv3378c (requalified) — diterpene synthase Rv3378c vapB15 (requalified) — antitoxin VapB15 vapB15 vapC44 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC44 vapC37 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC37 Rv3376 (family_assigned) — HAD family phosphatase Rv3376 Rv2275 (requalified) — cyclo(L-tyrosyl-L-tyrosyl) synthase Rv2275 Rv2955c (requalified) — [2-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-r Rv2955c Rv3087 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3087 vapB26 (requalified) — type II toxin-antitoxin system antitoxin VapB26 vapB26 vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 Rv0611c (family_assigned) — DUF4926 domain-containing protein Rv0611c vapC38 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC38 Rv2492 (requalified) — hypothetical protein Rv2492 Rv2491 (family_assigned) — TIGR00725 family protein Rv2491 vapB44 (family_assigned) — CopG family transcriptional regulator vapB44 mazE4 (requalified) — type II toxin-antitoxin system antitoxin MazE4 mazE4 vapC19 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC19 vapC18 (family_assigned) — PIN domain nuclease vapC18 vapB18 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB18 lppB (family_assigned) — LppA family lipoprotein lppB lppA (family_assigned) — LppA family lipoprotein lppA Rv3377c (requalified) — type B diterpene cyclase Rv3377c dxs2 (requalified) — 1-deoxy-D-xylulose-5-phosphate synthase dxs2 Rv3382c (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Rv3382c idsB (family_assigned) — polyprenyl synthetase family protein idsB vapC15 (family_assigned) — PIN domain nuclease vapC15 vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 Rv2008c (family_assigned) — hypothetical protein Rv2008c vapC2 (family_assigned) — PIN domain nuclease vapC2 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 Rv3322c (requalified) — methyltransferase Rv3322c moaX (requalified) — MoaD-MoaE fusion protein MoaX moaX moaC3 (requalified) — cyclic pyranopterin monophosphate synthase MoaC moaC3 vapC13 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC13 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapB37 (requalified) — antitoxin vapB37

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.