MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2549c · 42 genes shown · anchor vapB20 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC20 (requalified) — type II toxin-antitoxin system toxin 23S rRNA-spec vapC20 vapB20 (requalified) — type II toxin-antitoxin system antitoxin VapB20 vapB20 vapB26 (requalified) — type II toxin-antitoxin system antitoxin VapB26 vapB26 Rv2548A (dark) — hypothetical protein Rv2548A vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 Rv0611c (family_assigned) — DUF4926 domain-containing protein Rv0611c vapC10 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC10 Rv3386 (requalified) — transposase Rv3386 Rv2961 (requalified) — transposase Rv2961 Rv3387 (requalified) — transposase Rv3387 vapC19 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC19 vapB38 (requalified) — antitoxin vapB38 vapB19 (family_assigned) — CopG family transcriptional regulator vapB19 Rv3378c (requalified) — diterpene synthase Rv3378c vapB15 (requalified) — antitoxin VapB15 vapB15 Rv0580c (requalified) — mycobacterial cell wall protein Rv0580c Rv0580c vapB10 (family_assigned) — CopG family transcriptional regulator vapB10 Rv0579 (family_assigned) — Mut7-C RNAse domain-containing protein Rv0579 mog (family_assigned) — MogA/MoaB family molybdenum cofactor biosynthesis mog vapC18 (family_assigned) — PIN domain nuclease vapC18 vapB24 (requalified) — antitoxin vapB24 Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c PPE8 (family_assigned) — PPE family protein PPE8 PPE8 Rv0918 (family_assigned) — DUF1778 domain-containing protein Rv0918 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv0610c (family_assigned) — hypothetical protein Rv0610c Rv0612 (family_assigned) — hypothetical protein Rv0612 nlhH (family_assigned) — alpha/beta hydrolase nlhH lipI (family_assigned) — alpha/beta hydrolase lipI PE_PGRS25 (family_assigned) — PE-PGRS family protein PE_PGRS25 PE_PGRS25 vapB46 (requalified) — antitoxin VapB46 vapB46 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 Rv0790c (family_assigned) — transglutaminase-like domain-containing protein Rv0790c mazF4 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF4 Rv2086 (family_assigned) — hypothetical protein Rv2086 Rv2960c (dark) — hypothetical protein Rv2960c vapB18 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB18 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 Rv3098A (family_assigned) — PemK-like protein Rv3098A

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.