MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2547 · 45 genes shown · anchor vapC19 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB19 (family_assigned) — CopG family transcriptional regulator vapB19 vapC19 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC19 vapC18 (family_assigned) — PIN domain nuclease vapC18 vapB18 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB18 lppB (family_assigned) — LppA family lipoprotein lppB lppA (family_assigned) — LppA family lipoprotein lppA vapB44 (family_assigned) — CopG family transcriptional regulator vapB44 vapB38 (requalified) — antitoxin vapB38 vapB20 (requalified) — type II toxin-antitoxin system antitoxin VapB20 vapB20 vapB27 (requalified) — type II toxin-antitoxin system antitoxin VapB27 vapB27 mazE4 (requalified) — type II toxin-antitoxin system antitoxin MazE4 mazE4 vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapC44 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC44 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 Rv3098A (family_assigned) — PemK-like protein Rv3098A vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 Rv2542 (family_assigned) — alpha/beta hydrolase family protein Rv2542 moaX (requalified) — MoaD-MoaE fusion protein MoaX moaX Rv3322c (requalified) — methyltransferase Rv3322c moaC3 (requalified) — cyclic pyranopterin monophosphate synthase MoaC moaC3 vapC38 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC38 Rv2492 (requalified) — hypothetical protein Rv2492 Rv2491 (family_assigned) — TIGR00725 family protein Rv2491 vapC20 (requalified) — type II toxin-antitoxin system toxin 23S rRNA-spec vapC20 Rv2548A (dark) — hypothetical protein Rv2548A Rv3378c (requalified) — diterpene synthase Rv3378c vapB15 (requalified) — antitoxin VapB15 vapB15 vapC27 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC27 Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c Rv0597c (family_assigned) — ATP-binding protein Rv0597c Rv0601c (requalified) — two component sensor kinase HK2 Rv0601c vapC29 (requalified) — type II toxin-antitoxin system ribonuclease VapC29 vapC29 mazF4 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF4 meaB (requalified) — methylmalonyl Co-A mutase-associated GTPase MeaB meaB mutB (requalified) — methylmalonyl-CoA mutase mutB mutA (family_assigned) — methylmalonyl-CoA mutase small subunit mutA lipL (family_assigned) — serine hydrolase domain-containing protein lipL Rv1491c (family_assigned) — TVP38/TMEM64 family protein Rv1491c vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 vapC28 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC28 vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 vapC36 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC36 vapC34 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC34

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.