MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2539c · 42 genes shown · anchor aroB · open gene page → · ← back to 1 hop

Evidence: Min score 0
aroK (requalified) — shikimate kinase AroK aroK aroB (requalified) — 3-dehydroquinate synthase aroB aroF (requalified) — chorismate synthase aroF aroE (requalified) — shikimate dehydrogenase aroE aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA aroD (requalified) — type II 3-dehydroquinate dehydratase aroD mltG (requalified) — endolytic transglycosylase MltG mltG Rv2551c (family_assigned) — A24 family peptidase Rv2551c Rv2541 (dark) — hypothetical protein Rv2541 ruvX (requalified) — Holliday junction resolvase RuvX ruvX alaS (requalified) — alanine--tRNA ligase alaS gltB (family_assigned) — glutamate synthase large subunit gltB rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ aroG (requalified) — 3-deoxy-7-phosphoheptulonate synthase class II aroG Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c Rv0948c (requalified) — chorismate mutase Rv0948c Rv1885c (requalified) — chorismate mutase Rv1885c cmk (requalified) — (d)CMP kinase cmk rsgA (family_assigned) — ribosome small subunit-dependent GTPase A rsgA mbtI (requalified) — salicylate synthase mbtI entC (requalified) — isochorismate synthase entC Rv2556c (requalified) — secondary thiamine-phosphate synthase enzyme YjbQ Rv2556c eccE5 (family_assigned) — type VII secretion system ESX-5 subunit EccE5 eccE5 dprA (requalified) — DNA-processing protein DprA dprA Rv2542 (family_assigned) — alpha/beta hydrolase family protein Rv2542 Rv3224 (requalified) — NAD(P)-dependent oxidoreductase Rv3224 Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 Rv1691 (family_assigned) — hypothetical protein Rv1691 Rv3529c (requalified) — TLR2-mediated response inhibitor Rv3529c Rv2267c (requalified) — sulfotransferase Rv2267c gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB sigA (requalified) — RNA polymerase sigma factor sigA rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA helZ (requalified) — DEAD/DEAH box helicase helZ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.