MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2538c · 46 genes shown · anchor aroK · open gene page → · ← back to 1 hop

Evidence: Min score 0
aroB (requalified) — 3-dehydroquinate synthase aroB aroK (requalified) — shikimate kinase AroK aroK aroD (requalified) — type II 3-dehydroquinate dehydratase aroD aroF (requalified) — chorismate synthase aroF aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA aroE (requalified) — shikimate dehydrogenase aroE aroG (requalified) — 3-deoxy-7-phosphoheptulonate synthase class II aroG tyrA (requalified) — prephenate dehydrogenase TyrA tyrA ppx2 (requalified) — exopolyphosphatase Ppx2 ppx2 smpB (family_assigned) — SsrA-binding protein SmpB smpB gcp (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera gcp Rv2541 (dark) — hypothetical protein Rv2541 gltB (family_assigned) — glutamate synthase large subunit gltB mltG (requalified) — endolytic transglycosylase MltG mltG mbtI (requalified) — salicylate synthase mbtI entC (requalified) — isochorismate synthase entC Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c Rv0948c (requalified) — chorismate mutase Rv0948c Rv1885c (requalified) — chorismate mutase Rv1885c cmk (requalified) — (d)CMP kinase cmk rsgA (family_assigned) — ribosome small subunit-dependent GTPase A rsgA Rv2551c (family_assigned) — A24 family peptidase Rv2551c Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c Rv2180c (family_assigned) — integral membrane protein Rv2180c Rv2181 (requalified) — alpha-(1-2)-phosphatidylinositol mannoside mannosy Rv2181 hisC2 (requalified) — histidinol-phosphate transaminase hisC2 hisC1 (requalified) — histidinol-phosphate aminotransferase hisC1 cobC (requalified) — aminotransferase cobC pheA (requalified) — prephenate dehydratase pheA Rv1025 (dark) — hypothetical protein Rv1025 Rv0496 (family_assigned) — hypothetical protein Rv0496 relA (family_assigned) — RelA/SpoT family protein relA Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 eno (requalified) — phosphopyruvate hydratase eno ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 rpsO (requalified) — 30S ribosomal protein S15 rpsO rpsD (requalified) — 30S ribosomal protein S4 rpsD rplS (requalified) — 50S ribosomal protein L19 rplS rplO (requalified) — 50S ribosomal protein L15 rplO rpsH (requalified) — 30S ribosomal protein S8 rpsH rpsG (requalified) — 30S ribosomal protein S7 rpsG tsaB (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaB tsaE (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaE rimI (requalified) — ribosomal protein S18-alanine N-acetyltransferase rimI alr (requalified) — alanine racemase alr groES (requalified) — chaperonin GroES groES

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.