MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2533c · 46 genes shown · anchor efp · open gene page → · ← back to 1 hop

Evidence: Min score 0
nusB (requalified) — transcription antitermination factor NusB nusB Rv2532c (requalified) — antitermination protein NusB Rv2532c efp (requalified) — elongation factor P efp pepQ (family_assigned) — Xaa-Pro peptidase family protein pepQ rpsJ (requalified) — 30S ribosomal protein S10 rpsJ nusA (requalified) — transcription termination factor NusA nusA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH fmt (requalified) — methionyl-tRNA formyltransferase fmt Rv2531c (requalified) — amino acid decarboxylase Rv2531c Rv2536 (family_assigned) — B-4DMT family transporter Rv2536 rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB vapB39 (requalified) — antitoxin VapB39 vapB39 rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rplR (requalified) — 50S ribosomal protein L18 rplR rplV (requalified) — 50S ribosomal protein L22 rplV rplM (requalified) — 50S ribosomal protein L13 rplM rpsD (requalified) — 30S ribosomal protein S4 rpsD nadE (requalified) — NAD(+) synthase nadE rpsP (requalified) — 30S ribosomal protein S16 rpsP rplC (requalified) — 50S ribosomal protein L3 rplC rpmI (requalified) — 50S ribosomal protein L35 rpmI rpsM (requalified) — 30S ribosomal protein S13 rpsM rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC rimP (requalified) — ribosome maturation factor RimP rimP rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rplK (requalified) — 50S ribosomal protein L11 rplK rpsG (requalified) — 30S ribosomal protein S7 rpsG sigA (requalified) — RNA polymerase sigma factor sigA rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA helZ (requalified) — DEAD/DEAH box helicase helZ fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu Rv3403c (family_assigned) — FAD/NAD(P)-binding protein Rv3403c pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP Rv3402c (family_assigned) — DegT/DnrJ/EryC1/StrS family aminotransferase Rv3402c priA (family_assigned) — primosomal protein N' priA ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribC (requalified) — riboflavin synthase ribC metK (requalified) — S-adenosylmethionine synthetase metK mscL (requalified) — large-conductance mechanosensitive channel protein mscL ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.