MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2530A · 42 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB39 (requalified) — antitoxin VapB39 vapB39 Rv2531c (requalified) — amino acid decarboxylase Rv2531c vapC39 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC39 Rv2532c (requalified) — antitermination protein NusB Rv2532c nusB (requalified) — transcription antitermination factor NusB nusB efp (requalified) — elongation factor P efp pepQ (family_assigned) — Xaa-Pro peptidase family protein pepQ Rv2536 (family_assigned) — B-4DMT family transporter Rv2536 vapB27 (requalified) — type II toxin-antitoxin system antitoxin VapB27 vapB27 vapB19 (family_assigned) — CopG family transcriptional regulator vapB19 cas2 (requalified) — CRISPR-associated endonuclease Cas2 cas2 arcA (requalified) — arginine deiminase arcA argH (requalified) — argininosuccinate lyase argH Rv1722 (requalified) — biotin carboxylase Rv1722 vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 rpsJ (requalified) — 30S ribosomal protein S10 rpsJ nusA (requalified) — transcription termination factor NusA nusA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rplR (requalified) — 50S ribosomal protein L18 rplR rplV (requalified) — 50S ribosomal protein L22 rplV rplM (requalified) — 50S ribosomal protein L13 rplM rpsD (requalified) — 30S ribosomal protein S4 rpsD nadE (requalified) — NAD(+) synthase nadE vapC27 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC27 Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c Rv0597c (family_assigned) — ATP-binding protein Rv0597c Rv0601c (requalified) — two component sensor kinase HK2 Rv0601c vapC29 (requalified) — type II toxin-antitoxin system ribonuclease VapC29 vapC29 vapC19 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC19 vapC18 (family_assigned) — PIN domain nuclease vapC18 vapB18 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB18 lppB (family_assigned) — LppA family lipoprotein lppB lppA (family_assigned) — LppA family lipoprotein lppA vapB44 (family_assigned) — CopG family transcriptional regulator vapB44 cas1 (requalified) — CRISPR-associated endonuclease Cas1 cas1 cas10 (requalified) — type III-A CRISPR-associated protein Cas10/Csm1 cas10 csm3 (requalified) — type III-A CRISPR-associated RAMP protein Csm3 csm3 csm4 (requalified) — type III-A CRISPR-associated RAMP protein Csm4 csm4 Rv2824c (requalified) — CRISPR-associated endoribonuclease Cas6 Rv2824c csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.