MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2520c · 46 genes shown · anchor bcp · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c bcp (requalified) — thioredoxin-dependent thiol peroxidase bcp Rv3311 (family_assigned) — primosomal protein Rv3311 rseA (requalified) — anti-sigma E factor RseA rseA Rv1209 (family_assigned) — DivIVA domain-containing protein Rv1209 Rv1109c (requalified) — lipid droplet-associated protein Rv1109c cfp6 (requalified) — low molecular weight protein antigen 6 cfp6 Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c Rv3013 (family_assigned) — amino acid-binding protein Rv3013 Rv2468c (requalified) — hypothetical protein Rv2468c Rv2170 (requalified) — N-acetyltransferase Rv2170 Rv1083 (dark) — hypothetical protein Rv1083 ahpC (requalified) — peroxiredoxin AhpC ahpC mrp (family_assigned) — Mrp/NBP35 family ATP-binding protein mrp tyrA (requalified) — prephenate dehydrogenase TyrA tyrA trxC (requalified) — thioredoxin trxC trxB1 (requalified) — thioredoxin trxB1 sapM (requalified) — phosphatidylinositol-3-phosphatase sapM Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c tatB (requalified) — Sec-independent protein translocase protein TatB tatB sigE (requalified) — RNA polymerase sigma factor SigE sigE htrA (requalified) — serine protease HtrA htrA ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 tagA (requalified) — DNA-3-methyladenine glycosylase I tagA folP2 (requalified) — dihydropteroate synthase folP2 gpgS (requalified) — glucosyl-3-phosphoglycerate synthase gpgS xseA (family_assigned) — exodeoxyribonuclease VII large subunit xseA xseB (family_assigned) — exodeoxyribonuclease VII small subunit xseB Rv1106c (requalified) — 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-is Rv1106c lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 rhlE (requalified) — DEAD/DEAH box helicase rhlE Rv3205c (family_assigned) — hypothetical protein Rv3205c lppL (family_assigned) — hypothetical protein lppL cei (requalified) — envelope integrity protein Cei cei rpsD (requalified) — 30S ribosomal protein S4 rpsD rplB (requalified) — 50S ribosomal protein L2 rplB rpmE (requalified) — 50S ribosomal protein L31 rpmE rpsO (requalified) — 30S ribosomal protein S15 rpsO rplO (requalified) — 50S ribosomal protein L15 rplO rpsE (requalified) — 30S ribosomal protein S5 rpsE Rv2468A (family_assigned) — hypothetical protein Rv2468A qcrA (requalified) — hypothetical protein qcrA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.