MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2517c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2517c (dark) — hypothetical protein Rv2517c Rv2516c (dark) — hypothetical protein Rv2516c Rv2515c (family_assigned) — XRE family transcriptional regulator Rv2515c Rv2514c (family_assigned) — DUF4411 family protein Rv2514c lat (requalified) — L-lysine 6-transaminase lat bkdA (family_assigned) — pyruvate dehydrogenase (acetyl-transferring) E1 co bkdA Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 Rv0095c (family_assigned) — hypothetical protein Rv0095c Rv1588c (family_assigned) — hypothetical protein Rv1588c Rv1805c (dark) — hypothetical protein Rv1805c Rv1057 (family_assigned) — YncE family protein Rv1057 ruvA (requalified) — Holliday junction branch migration protein RuvA ruvA Rv0332 (family_assigned) — hypothetical protein Rv0332 Rv1371 (family_assigned) — cytochrome b5 domain-containing protein Rv1371 PPE42 (family_assigned) — PPE family protein PPE42 PPE42 papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 Rv3289c (dark) — hypothetical protein Rv3289c usfY (family_assigned) — hypothetical protein usfY lrpA (family_assigned) — transcriptional regulator LrpA lrpA pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv3292 (family_assigned) — VOC family protein Rv3292 mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c mez (requalified) — NAD-dependent malic enzyme mez cobB (requalified) — NAD-dependent protein deacylase cobB Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c embR (requalified) — response regulator transcription factor EmbR embR mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 PPE1 (family_assigned) — PPE family protein PPE1 PPE1 fcoT (requalified) — fatty acyl CoA thioesterase FcoT fcoT Rv0097 (family_assigned) — TauD/TfdA family dioxygenase Rv0097 nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp Rv0100 (requalified) — acyl carrier protein Rv0100 fadD10 (requalified) — fatty-acid--CoA ligase FadD10 fadD10 Rv1587c (family_assigned) — hypothetical protein Rv1587c Rv1586c (family_assigned) — recombinase family protein Rv1586c Rv1585c (family_assigned) — hypothetical protein Rv1585c Rv3466 (family_assigned) — hypothetical protein Rv3466 Rv1582c (family_assigned) — phage/plasmid primase%2C P4 family Rv1582c Rv1583c (dark) — DUF2742 domain-containing protein Rv1583c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.