MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2511 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
orn (requalified) — oligoribonuclease orn Rv2510c (family_assigned) — DUF853 domain-containing protein Rv2510c Rv2478c (family_assigned) — hypothetical protein Rv2478c ssb (family_assigned) — single-stranded DNA-binding protein ssb rne (family_assigned) — Rne/Rng family ribonuclease rne Rv2191 (family_assigned) — hypothetical protein Rv2191 pcnA (requalified) — poly(A) polymerase PcnA pcnA rphA (requalified) — ribonuclease PH rphA gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI Rv1930c (requalified) — glutamine amidotransferase Rv1930c nrnA (requalified) — bifunctional oligoribonuclease/PAP phosphatase Nrn nrnA cysQ (requalified) — 3'(2')%2C5'-bisphosphate nucleotidase CysQ cysQ rnj (requalified) — ribonuclease J rnj Rv2575 (requalified) — neutral zinc metallopeptidase Rv2575 dnaE2 (requalified) — error-prone DNA polymerase dnaE2 Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c ettA (requalified) — energy-dependent translational throttle protein Et ettA priA (family_assigned) — primosomal protein N' priA rplI (requalified) — 50S ribosomal protein L9 rplI rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 dnaB (requalified) — replicative DNA helicase dnaB eno (requalified) — phosphopyruvate hydratase eno phoH2 (family_assigned) — PhoH family protein phoH2 rapZ (requalified) — RNase adapter RapZ rapZ rplU (requalified) — 50S ribosomal protein L21 rplU uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv3906c (requalified) — pullulanase Rv3906c dapB (requalified) — 4-hydroxy-tetrahydrodipicolinate reductase dapB mutT4 (requalified) — NUDIX hydrolase mutT4 Rv3909 (dark) — hypothetical protein Rv3909 murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 rdgB (family_assigned) — RdgB/HAM1 family non-canonical purine NTP pyrophos rdgB Rv2681 (requalified) — ribonuclease D Rv2681 rpsA (requalified) — 30S ribosomal protein S1 rpsA Rv1339 (family_assigned) — hypothetical protein Rv1339 rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsK (requalified) — 30S ribosomal protein S11 rpsK rhlE (requalified) — DEAD/DEAH box helicase rhlE rplD (requalified) — 50S ribosomal protein L4 rplD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.